UniGene Name: sp_v3.0_unigene74746
Length: 205 nt
This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense
UniGene Fasta (sense) |
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>sp_v3.0_unigene74746
G |
Ace file of the UniGene sp_v3.0_unigene74746 (antisense) |
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Annotations |
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Source | Descriptions | Term | Type | e value | Identity |
---|---|---|---|---|---|
AutoFact | Cytokinin oxidase/dehydrogenase n=1 Tax=Solanum tuberosum RepID=C3VPM6_SOLTU | - | - | 2.0e-13 | 92% |
FL-Next | sp=Cytokinin dehydrogenase 6; Arabidopsis thaliana (Mouse-ear cress). | - | - | 0.0 | 92% |
Sma3 | Cytokinin oxidase | - | - | 7.678e-35 | - |
Source | ECs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Cytokinin dehydrogenase. | EC:1.5.99.12 | - | 0.0 | - |
Source | KEGGs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Zeatin biosynthesis | 00908 | 0.0 | % |
Source | Gene names |
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Sma3 | At1g75450; At2g41510; At3g63440; At5g21482; At5g56970; B1046G12.8; B1131G07.3; B1131G07.5; B1150F11.25; BoCKX1; BrCKX1; CKX; CKX1; CKX10; CKX3; CKX5; CKX6; CKX7; F13M11.?; F1B16.2; GSVIVT00013006001; GSVIVT00014541001; GSVIVT00016550001; GSVIVT00025661001 |
Source | GOs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | extracellular region | GO:0005576 | Cellular Component | 0.0 | - |
Sma3 | vacuole | GO:0005773 | Cellular Component | 0.0 | - |
Sma3 | endoplasmic reticulum | GO:0005783 | Cellular Component | 0.0 | - |
Sma3 | primary amine oxidase activity | GO:0008131 | Molecular Function | 0.0 | - |
Sma3 | electron carrier activity | GO:0009055 | Molecular Function | 0.0 | - |
Sma3 | cytokinin dehydrogenase activity | GO:0019139 | Molecular Function | 0.0 | - |
Sma3 | flavin adenine dinucleotide binding | GO:0050660 | Molecular Function | 0.0 | - |
Sma3 | cytokinin metabolic process | GO:0009690 | Biological Process | 0.0 | - |
Sma3 | cytokinin catabolic process | GO:0009823 | Biological Process | 0.0 | - |
Sma3 | inflorescence development | GO:0010229 | Biological Process | 0.0 | - |
Sma3 | meristem development | GO:0048507 | Biological Process | 0.0 | - |
Sma3 | oxidation-reduction process | GO:0055114 | Biological Process | 0.0 | - |
Source | InterPros | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Oxygen oxidoreductase covalent FAD-binding site | IPR006093 | - | 0.0 | - |
Sma3 | FAD linked oxidase, N-terminal | IPR006094 | - | 0.0 | - |
Sma3 | Cytokinin dehydrogenase 1, FAD/cytokinin binding domain | IPR015345 | - | 0.0 | - |
Sma3 | FAD-binding, type 2 | IPR016166 | - | 0.0 | - |
Sma3 | FAD-binding, type 2, subdomain 1 | IPR016167 | - | 0.0 | - |
Sma3 | FAD-linked oxidase, FAD-binding, subdomain 2 | IPR016168 | - | 0.0 | - |
Sma3 | Peroxidases heam-ligand binding site | IPR019793 | - | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
---|---|---|---|---|---|
ATG | Arabidoptis thaliana | AT3G63440.1 | ATCKX6, CKX6, ATCKX7 cytokinin oxidase/dehydrogenase 6 chr3:23424291-23426265 FORWARD LENGTH=533 | 2.0e-18 | 92% |
RefSeq | Arabidopsis thaliana | NP_191903.3 | cytokinin oxidase/dehydrogenase 6 [Arabidopsis thaliana] | 3.0e-18 | 92% |
RefSeq | Populus trichocarpa | XP_002308930.1 | cytokinin oxidase [Populus trichocarpa] | 7.0e-18 | 89% |
Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: sp_plants
Fln subject: Q9LY71
Fln msg: Distance to subject end: 338 aas, your sequence is shorter than subject: 68 - 533
Fln protein:
G
Protein Length:
69
Fln nts:
G
Fln Alignment:
GFIJCBT03G9PG6___LHATLKEGFAPKSWTDYLHLTVGGTLSNAGISGQAFRHG
Q9LY71_______________LHETLKYGLAPKSWTDYLHLTVGGTLSNAGISGQAFRHG
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain