SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene74630

Length: 215 nt

UniGene Fasta

>sp_v3.0_unigene74630
GGATGGATGCAACCTCACTGCTTATAACCTTTCGACTGGAGAGTACAATATATACAAGAAACTTTCCCCAACGGCTCTTGGGGGAAATGAACGGTATCCAAAGCGCATGCTATACAGTGAAAAGCAACACCTTTTTCTGGTTGTCTTTGAATTGCGTGATGCAACCAATGAGGTTGTTATATATCGAGACCTTATTGACTTGCAAGCTGTTGGTG

Ace file of the UniGene sp_v3.0_unigene74630

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss).	-	-	0.0	67%

Source	Gene names
Sma3	PHYPADRAFT_124044;

Source	InterPros	Term	Type	Identity
Sma3	WD40 repeat	IPR001680	-	-
Sma3	WD40/YVTN repeat-like-containing domain	IPR015943	-	-
Sma3	WD40 repeat, conserved site	IPR019775	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G50590.1	Transducin/WD40 repeat-like superfamily protein chr3:18771292-18779220 FORWARD LENGTH=1614	2.0e-14	55%
RefSeq	Arabidopsis thaliana	NP_190628.6	transducin/WD40 domain-containing protein [Arabidopsis thaliana]	2.0e-14	55%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: D8SZD9

Fln msg: Distance to subject end: 1055 aas, your sequence is shorter than subject: 71 - 1594

Fln protein: DGCNLTAYNLSTGEYNIYKKLSPTALGGNERYPKRMLYSEKQHLFLVVFELRDATNEVVIYRDLIDLQAVG

Protein Length: 72

Fln nts: GGATGGATGCAACCTCACTGCTTATAACCTTTCGACTGGAGAGTACAATATATACAAGAAACTTTCCCCAACGGCTCTTGGGGGAAATGAACGGTATCCAAAGCGCATGCTATACAGTGAAAAGCAACACCTTTTTCTGGTTGTCTTTGAATTGCGTGATGCAACCAATGAGGTTGTTATATATCGAGACCTTATTGACTTGCAAGCTGTTGGTG

Fln Alignment:

GFIJCBT03G1OEX___DGCNLTAYNLSTGEYNIYKKLSPTALGGNERYPKRMLYSEKQHLFLVVFELRDATNEVVIYRDLIDLQAVG
D8SZD9_______________DGCNLSAYNLASGDYNIYKKLSPTALGGQERSPTHMLYSSRQHLFLIFFECRGAIGEIVIYRESLTAEAVG

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain