SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene74419

Length: 216 nt

UniGene Fasta

>sp_v3.0_unigene74419
TCTTCTAAGCATCAGCATAGAATATCCTGGGGATATTGGGGTGATCAGCAAAATCTCTCAGAGGAGACCTATGCAATGATCTGTCGAATATGTGAGGAAGAAGTGCCCACATCTCACTTAGAAGAGCACTTGCGTCTTTGTACAATTGCTGATAGATGTGACCTAAAGGGTTTAAGTGTAGATGAACGCCTGAGAAGGATTGCGGAAACTCTTGAG

Ace file of the UniGene sp_v3.0_unigene74419

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Kinase, putative n=1 Tax=Ricinus communis RepID=B9T5A7_RICCO	-	-	1.0e-24	72%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	75%

Source	Gene names
Sma3	AT1G48490; At3g17850/MEB5_7; At5g62310; GSVIVT00008775001; GSVIVT00014639001; GSVIVT00017880001; IRE; IREH1; LOC_Os03g50390; OSJNBb0033N16.3; Os03g0711800; OsI_13249; OsJ_12320; PHYPADRAFT_140919; PHYPADRAFT_148894; PHYPADRAFT_150879; PHYPADRAFT_152077; P

Source	GOs	Term	Type	Identity
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	protein serine/threonine kinase activity	GO:0004674	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	protein phosphorylation	GO:0006468	Biological Process	-
Sma3	unidimensional cell growth	GO:0009826	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	AGC-kinase, C-terminal	IPR000961	-	-
Sma3	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3		IPR017442	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G17850.1	Protein kinase superfamily protein chr3:6109854-6116245 REVERSE LENGTH=1296	1.0e-27	65%
RefSeq	Arabidopsis thaliana	NP_188412.2	protein kinase family protein [Arabidopsis thaliana]	2.0e-27	65%
RefSeq	Populus trichocarpa	XP_002318507.1	predicted protein [Populus trichocarpa]	2.0e-30	72%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: F6GSP4

Fln msg: Distance to subject end: 648 aas, your sequence is shorter than subject: 72 - 1306

Fln protein: SSKHQHRISWGYWGDQQNLSEETYAMICRICEEEVPTSHLEEHLRLCTIADRCDLKGLSVDERLRRIAETLE

Protein Length: 73

Fln nts: TCTTCTAAGCATCAGCATAGAATATCCTGGGGATATTGGGGTGATCAGCAAAATCTCTCAGAGGAGACCTATGCAATGATCTGTCGAATATGTGAGGAAGAAGTGCCCACATCTCACTTAGAAGAGCACTTGCGTCTTTGTACAATTGCTGATAGATGTGACCTAAAGGGTTTAAGTGTAGATGAACGCCTGAGAAGGATTGCGGAAACTCTTGAG

Fln Alignment:

GFIJCBT03GWIS1___SSKHQHRISWGYWGDQQNLSEETYAMICRICEEEVPTSHLEEHLRLCTIADRCDLKGLSVDERLRRIAETLE
F6GSP4_______________SSKHQHKASWGYWGDQPNISEDS-SIICRICEEEVPTSHVEDHSRICAIADRCDQKGISVNERLIRIAETLE

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain