SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene74024

Length: 408 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

>sp_v3.0_unigene74024
TATGGTCATCAAAAGGGCCATGTTGAGAAGACAAAATCTGTTTTGAATGATATAATTGTTGATGATGATAATGAGCAGCCAACTAACATTTCTGTAGTTAGTGGCTTAACTCCACCAAGCAGCCCTTCATCAATTTCTTCAACATCAAGTTCAAGTCCAACTTCTTCTCCAAGTTCTACAAGGAAGGTAAGAAGATTGAGTGATATTTATGAGAGGAGTGCAAATCAAGCACATGAAGAAAGCCCAATAGGTGAGATAGTCAATTTTGCTTTATTAGCTAATGCTGAATTTGAACCATCATGTTTTGAAGATGCATGTACTAATGAAGTTTGGATGCAAGCCATGCAAGAAGAGATGGATTCCATTCAAAGGAATGACACTTGGAAGTTGACAGAGCTTCCACATGAC

Ace file of the UniGene sp_v3.0_unigene74024 (antisense)

If you push the Download ace button, you will download an ace file of this UniGene.

To watch this ACE file you will need an ACE viewer program as Tablet:

Go to the Tablet ACE viewer Web

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	T26F17.17 n=1 Tax=Arabidopsis thaliana RepID=Q9SFE1_ARATH	-	-	2.0e-06	39%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	41%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: A5B9M8

Fln msg: Distance to subject end: 464 aas, your sequence is shorter than subject: 136 - 1291

Fln protein: YGHQKGHVEKTKSVLNDIIVDDDNEQPTNISVVSGLTPPSSPSSISSTSSSSPTSSPSSTRKVRRLSDIYERSANQAHEESPIGEIVNFALLANAEFEPSCFEDACTNEVWMQAMQEEMDSIQRNDTWKLTELPHD

Protein Length: 137

Fln nts: TATGGTCATCAAAAGGGCCATGTTGAGAAGACAAAATCTGTTTTGAATGATATAATTGTTGATGATGATAATGAGCAGCCAACTAACATTTCTGTAGTTAGTGGCTTAACTCCACCAAGCAGCCCTTCATCAATTTCTTCAACATCAAGTTCAAGTCCAACTTCTTCTCCAAGTTCTACAAGGAAGGTAAGAAGATTGAGTGATATTTATGAGAGGAGTGCAAATCAAGCACATGAAGAAAGCCCAATAGGTGAGATAGTCAATTTTGCTTTATTAGCTAATGCTGAATTTGAACCATCATGTTTTGAAGATGCATGTACTAATGAAGTTTGGATGCAAGCCATGCAAGAAGAGATGGATTCCATTCAAAGGAATGACACTTGGAAGTTGACAGAGCTTCCACATGAC

Fln Alignment:

GFIJCBT03GAZLP___KVRRLSDIYERSANQAHEESPIGEIVNFALLANAEFEPSCFEDACTNEVWMQAMQEEMDSIQRNDTWKLTELP
A5B9M8_______________KMRPLSDVYER-CNLVHAE------------------PTCYTEAARFLEWIEAMKAEIDAIERNGTWKLTELP

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain