SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene73748

Length: 194 nt

UniGene Fasta

>sp_v3.0_unigene73748
GGAATCAACACAGCTCATGTTCTTGATCCGATTTGTTTCCCCATTTCTAAGAAGCAAGAAAGTCAAAGCAGTCAAAAGTTCATAACCAAGAGGTACGAGAAATTAGAAGTATTTGATCAGCTGCTTGGATCAAGGAGGAGGATGTTTAGTCATGGTTGCTTCACAAAATCCTCTGAGGACGAGTGTCTGACAGT

Ace file of the UniGene sp_v3.0_unigene73748

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	1.0e-16	70%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	85%

Source	InterPros	Term	Type	e value	Identity
Sma3	Peptidase S10, serine carboxypeptidase	IPR001563	-	0.0	-
Sma3	Peptidase S10, serine carboxypeptidase, active site	IPR018202	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LL22

Fln msg: Distance to subject end: 158 aas, your sequence is shorter than subject: 64 - 505

Fln protein: GINTAHVLDPICFPISKKQESQSSQKFITKRYEKLEVFDQLLGSRRRMFSHGCFTKSSEDECLT

Protein Length: 65

Fln nts: GGAATCAACACAGCTCATGTTCTTGATCCGATTTGTTTCCCCATTTCTAAGAAGCAAGAAAGTCAAAGCAGTCAAAAGTTCATAACCAAGAGGTACGAGAAATTAGAAGTATTTGATCAGCTGCTTGGATCAAGGAGGAGGATGTTTAGTCATGGTTGCTTCACAAAATCCTCTGAGGACGAGTGTCTGACAGT

Fln Alignment:

GFIJCBT03F2P3E___GINTAHVLDPICFPIXXXXXXXXXXXFITKRYEKLEVFDQLLGSRRRMFSHGCFTKSSEDECLT
B8LL22_______________GINTAHILDPICFPISKKQESLSSQKILTKRYEKLEVFDQLLESRRRMSSHGWFTKSSEDGYLT

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain