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UniGene Name: sp_v3.0_unigene73563
Length: 240 nt
 UniGene Fasta
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| >sp_v3.0_unigene73563
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Ace file of the UniGene sp_v3.0_unigene73563
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If you push the Download ace button, you will download an ace file of this UniGene.
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| Annotations |
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| Source | Descriptions | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| AutoFact | ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9SMW2_RICCO | - | - | 7.0e-12 | 47% |
| FL-Next | tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). | - | - | 0.0 | 57% |
| Sma3 | ATP-binding cassette transporter, putative | - | - | 1.936e-32 | - |
| Source | ECs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Phosphonate-transporting ATPase. | EC:3.6.3.28 | - | 1.87e-19 | - |
| Sma3 | Polyamine-transporting ATPase. | EC:3.6.3.31 | - | 4.848e-06 | - |
| Sma3 | Heme-transporting ATPase. | EC:3.6.3.41 | - | 3.765e-12 | - |
| Source | Gene names |
|---|---|
| Sma3 | ABC1; At1g15210; At1g15520; At1g59870; B1045F02.15; B1090H08.39; F23H11.19; F9L1.15; GSVIVT00012684001; GSVIVT00032575001; GSVIVT00032579001; GSVIVT00032583001; GSVIVT00034309001; GSVIVT00034319001; GSVIVT00034493001; GSVIVT00034498001; GSVIVT00034501001; |
| Source | GOs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | mitochondrion | GO:0005739 | Cellular Component | 0.0 | - |
| Sma3 | plasma membrane | GO:0005886 | Cellular Component | 0.0 | - |
| Sma3 | chloroplast | GO:0009507 | Cellular Component | 0.0 | - |
| Sma3 | chloroplast envelope | GO:0009941 | Cellular Component | 0.0 | - |
| Sma3 | membrane | GO:0016020 | Cellular Component | 0.0 | - |
| Sma3 | integral to membrane | GO:0016021 | Cellular Component | 0.0 | - |
| Sma3 | ATP binding | GO:0005524 | Molecular Function | 0.0 | - |
| Sma3 | cadmium ion transmembrane transporter activity | GO:0015086 | Molecular Function | 0.0 | - |
| Sma3 | ATPase activity | GO:0016887 | Molecular Function | 0.0 | - |
| Sma3 | transport | GO:0006810 | Biological Process | 0.0 | - |
| Sma3 | defense response | GO:0006952 | Biological Process | 0.0 | - |
| Sma3 | response to biotic stimulus | GO:0009607 | Biological Process | 0.0 | - |
| Sma3 | systemic acquired resistance | GO:0009627 | Biological Process | 0.0 | - |
| Sma3 | response to ethylene stimulus | GO:0009723 | Biological Process | 0.0 | - |
| Sma3 | response to salicylic acid stimulus | GO:0009751 | Biological Process | 0.0 | - |
| Sma3 | response to jasmonic acid stimulus | GO:0009753 | Biological Process | 0.0 | - |
| Sma3 | defense response to fungus, incompatible interaction | GO:0009817 | Biological Process | 0.0 | - |
| Sma3 | response to ozone | GO:0010193 | Biological Process | 0.0 | - |
| Sma3 | cadmium ion transport | GO:0015691 | Biological Process | 0.0 | - |
| Sma3 | lead ion transport | GO:0015692 | Biological Process | 0.0 | - |
| Sma3 | negative regulation of defense response | GO:0031348 | Biological Process | 0.0 | - |
| Source | InterPros | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Ribosomal protein L11 | IPR000911 | - | 0.0 | - |
| Sma3 | Legume lectin domain | IPR001220 | - | 0.0 | - |
| Sma3 | ABC transporter-like | IPR003439 | - | 0.0 | - |
| Sma3 | AAA+ ATPase domain | IPR003593 | - | 0.0 | - |
| Sma3 | Phosphopantetheine attachment site | IPR006162 | - | 0.0 | - |
| Sma3 | ABC-2 type transporter | IPR013525 | - | 0.0 | - |
| Sma3 | Plant PDR ABC transporter associated | IPR013581 | - | 0.0 | - |
| Sma3 | ABC transporter, conserved site | IPR017871 | - | 0.0 | - |
| Source | Species | ID | Description | e value | Identity |
|---|---|---|---|---|---|
| ATG | Arabidoptis thaliana | AT1G15520.1 | PDR12, ATPDR12, ABCG40, ATABCG40 pleiotropic drug resistance 12 chr1:5331993-5338175 REVERSE LENGTH=1423 | 7.0e-14 | 58% |
| RefSeq | Arabidopsis thaliana | NP_173005.1 | ABC transporter G family member 40 [Arabidopsis thaliana] | 9.0e-14 | 58% |
| RefSeq | Populus trichocarpa | XP_002304711.1 | predicted protein [Populus trichocarpa] | 1.0e-15 | 63% |
| Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: coniferopsida.fasta
Fln subject: D5ACV1
Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 78 aas, your sequence is shorter than subject: 69 - 412
Fln protein:
I
Protein Length:
70
Fln nts:
C
Fln Alignment:
GFIJCBT03GW65Z___ILVYSMISFEWTAAKXXXXXXXXXXXXXXXXXXXXXXVALTPSYHIAAIVSSAFICVESLL-WFHYSST*MPVWWRWYYW
D5ACV1_______________LIVYSMIDFQWTTVKFFWFLFYMFMCFVYFTLYGMMAVALTPGHQIAAIVSSFFYGFWNIFSGFLITRPQIPVWWRWYYW
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain
