SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene73443

Length: 188 nt

UniGene Fasta

>sp_v3.0_unigene73443
CGTCGTGACCTTGGCTGTCACTCATGTGGAGCCTGCAGCTGTTGAGAAGCCCATTACCTTGAAGCCTGGTGAAGAGTGGAAAGGAAGGTTGGAGCTCTCAGCTGTTCCTTCCAGTTACTATAGTGGCCAGTTAGATCCAGGACAAGGTTCTTCATGGTTGAAAATCCTCACTTGGTGCATCTCGTACA

Ace file of the UniGene sp_v3.0_unigene73443

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	putative Aldose 1-epimerase [Oryza sativa Japonica Group] dbj\|BAD05576.1\| putative Aldose 1-epimerase [Oryza sativa Japonica Group] dbj\|BAH00875.1\| unnamed protein product [Oryza sativa Japonica Group] gb\|EEC83157.1\| hypothetical protein OsI_28370 [Oryza	-	-	9.0e-13	94%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	89%
Sma3	Aldose 1-epimerase, putative	-	-	7.775e-11	-

Source	Gene names
Sma3	24K23.3; At5g14500; At5g57330; F18O22_290; GSVIVT00020653001; GSVIVT00026976001; GSVIVT00031339001; MtrDRAFT_AC155282g40v2; OSIGBa0118P15.1; OSIGBa0132E09-OSIGBa0108L24.1; OSJNBa0011F23.4; OSJNBa0041A02.19; OSJNBa0087F21.28; Os02g0176900; Os04g0603000; Os

Source	GOs	Term	Type	Identity
Sma3	isomerase activity	GO:0016853	Molecular Function	-
Sma3	carbohydrate binding	GO:0030246	Molecular Function	-
Sma3	carbohydrate metabolic process	GO:0005975	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Aldose 1-/Glucose-6-phosphate 1-epimerase	IPR008183	-	0.0	-
Sma3	Glycoside hydrolase-type carbohydrate-binding, subgroup	IPR014718	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G57330.1	Galactose mutarotase-like superfamily protein chr5:23218392-23220664 FORWARD LENGTH=312	4.0e-17	89%
RefSeq	Arabidopsis thaliana	NP_200543.1	glucose-6-phosphate 1-epimerase [Arabidopsis thaliana]	5.0e-17	89%
RefSeq	Populus trichocarpa	XP_002324462.1	predicted protein [Populus trichocarpa]	1.0e-17	94%

Full-Lengther Next Prediction

Fln status: Putative C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NT43

Fln msg: STOP codon was not found. Distance to subject end: 10 aas, your sequence is shorter than subject: 62 - 243

Fln protein: VVTLAVTHVEPAAVEKPITLKPGEEWKGRLELSAVPSSYYSGQLDPGQGSSWLKILTWCISY

Protein Length: 63

Fln nts: CGTCGTGACCTTGGCTGTCACTCATGTGGAGCCTGCAGCTGTTGAGAAGCCCATTACCTTGAAGCCTGGTGAAGAGTGGAAAGGAAGGTTGGAGCTCTCAGCTGTTCCTTCCAGTTACTATAGTGGCCAGTTAGATCCAGGACAAGGTTCTTCATGGTTGAAAATCCTCACTTGGTGCATCTCGTACA

Fln Alignment:

GG46A6U02IG7RA___VEPAAVEKPITLKPGEEWKGRLELSAVPSSYYSGQLDP
A9NT43_______________IEAAAVEKPITLKPGEEWKGRQELSAVPSSYFSGQLDP

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain