SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene73351

Length: 154 nt

UniGene Fasta

>sp_v3.0_unigene73351
CGTCGTGACCTTGGCTGTCACTCATGCACACCATTGGTCCTCAATTTGCATGGTGGGTTGTTGCTCAAAGTGTGTTCTACCATCTGTACAACCAAGTTTCATACATGTCCCTCAACGAAATATCGCCATTAACATTCAGCATAGGCAACACAAT

Ace file of the UniGene sp_v3.0_unigene73351

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Glucose-6-phosphate/phosphate translocator 1, chloroplastic n=2 Tax=Arabidopsis RepID=GPT1_ARATH	-	-	3.0e-16	78%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	82%
Sma3	Glucose-6-phosphate/phosphate-translocator	-	-	1.027e-11	-

Source	Gene names
Sma3	At1g61800; At5g54800; B1099H05.2; F8K4.1; GPT; GPT1; GPT2; GSVIVT00006900001; GSVIVT00027370001; MBG8.6; OJ1372_D12.143-1; OJ1372_D12.152; OSJNBb0052O11.102; Os07g0523600; Os08g0187800; OsI_26253; OsI_26255; OsI_28073; OsJ_24501; OsJ_26287; P0020B10.26; P

Source	GOs	Term	Type	Identity
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	chloroplast	GO:0009507	Cellular Component	-
Sma3	plastid	GO:0009536	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	transporter activity	GO:0005215	Molecular Function	-
Sma3	transport	GO:0006810	Biological Process	-
Sma3	response to nematode	GO:0009624	Biological Process	-
Sma3	response to sucrose stimulus	GO:0009744	Biological Process	-
Sma3	response to glucose stimulus	GO:0009749	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Drug/metabolite transporter	IPR000620	-	-
Sma3	Tpt phosphate/phosphoenolpyruvate translocator	IPR004696	-	-
Sma3	Domain of unknown function DUF250	IPR004853	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G54800.1	GPT1, ATGPT1 glucose 6-phosphate/phosphate translocator 1 chr5:22261408-22263562 FORWARD LENGTH=388	2.0e-22	78%
RefSeq	Arabidopsis thaliana	NP_568812.1	glucose-6-phosphate/phosphate translocator 1 [Arabidopsis thaliana]	3.0e-22	78%
RefSeq	Populus trichocarpa	XP_002316985.1	predicted protein [Populus trichocarpa]	3.0e-21	78%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NVQ5

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 40 aas, your sequence is shorter than subject: 50 - 420

Fln protein: S*PWLSLMHTIGPQFAWWVVAQSVFYHLYNQVSYMSLNEISPLTFSIGNT

Protein Length: 51

Fln nts: CGTCGTGACCTTGGCTGTCACTCATGCACACCATTGGTCCTCAATTTGCATGGTGGGTTGTTGCTCAAAGTGTGTTCTACCATCTGTACAACCAAGTTTCATACATGTCCCTCAACGAAATATCGCCATTAACATTCAGCATAGGCAACACAAT

Fln Alignment:

GG46A6U02HJGVD___WLSLMHTIGPQFAWWVVAQSVFYHLYNQVSYMSLNEISPLTFSIGNT
A9NVQ5_______________WQEALRAIGPQFVWWVAAQSVFYHLYNQVSYMSLNEISPLTFSIGNT

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain