SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene73107

Length: 144 nt

UniGene Fasta

>sp_v3.0_unigene73107
CGTCGTGACCTTGGCTGTCACTCACATTTTGCCACAGTTCACGGTGCAGCTGGTGCTTGTTCTTTTCTTTGCCAAAGATCTTCCACTCTGCCTTTTTGCACAGACAGTTGCATTCGTTGCTTTCAACAAGGTTATCACAGCACA

Ace file of the UniGene sp_v3.0_unigene73107

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	mannosyltransferase (PIG-M) domain containing protein [Oryza sativa Japonica Group]	-	-	5.0e-08	73%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	97%

Source	Gene names
Sma3	At5g22130; B1130H05.7; GSVIVT00034476001; LOC_Os03g46750; Os03g0670200; OsI_12951; PHYPADRAFT_140814; PIGM; PNT1; POPTRDRAFT_639801; T6G21.34; VITISV_017610;

Source	GOs	Term	Type	Identity
Sma3	nucleus	GO:0005634	Cellular Component	-
Sma3	endoplasmic reticulum membrane	GO:0005789	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	transferase activity, transferring hexosyl groups	GO:0016758	Molecular Function	-
Sma3	GPI anchor biosynthetic process	GO:0006506	Biological Process	-
Sma3	embryo development	GO:0009790	Biological Process	-
Sma3	plant-type cell wall biogenesis	GO:0009832	Biological Process	-
Sma3	cellulose biosynthetic process	GO:0030244	Biological Process	-
Sma3	cell division	GO:0051301	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Cyclin, C-terminal	IPR004367	-	-
Sma3		IPR006670	-	-
Sma3	Cyclin, N-terminal	IPR006671	-	-
Sma3	Mannosyltransferase, DXD	IPR007704	-	-
Sma3	Cyclin-like	IPR013763	-	-
Sma3	Cyclin A, G2/mitotic-specific	IPR015453	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G22130.2	-	4.0e-11	71%
RefSeq	Arabidopsis thaliana	NP_680199.1	GPI mannosyltransferase 1 [Arabidopsis thaliana]	5.0e-11	71%
RefSeq	Populus trichocarpa	XP_002299189.1	predicted protein [Populus trichocarpa]	2.0e-11	77%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LMK7

Fln msg: Distance to subject end: 100 aas, your sequence is shorter than subject: 47 - 293

Fln protein: VVTLAVTHILPQFTVQLVLVLFFAKDLPLCLFAQTVAFVAFNKVITA

Protein Length: 48

Fln nts: CGTCGTGACCTTGGCTGTCACTCACATTTTGCCACAGTTCACGGTGCAGCTGGTGCTTGTTCTTTTCTTTGCCAAAGATCTTCCACTCTGCCTTTTTGCACAGACAGTTGCATTCGTTGCTTTCAACAAGGTTATCACAGCACA

Fln Alignment:

GG46A6U02FGTFG___LPQFTVQLVLVLFFAKDLPLCLFAQTVAFVAFNKVITA
B8LMK7_______________LPQFSVQLVLVLFFAKDLPLCLFAQTVAFVAFNKVITA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain