SustainPineDB

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Assembly info
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SSRs
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene73004

Length: 208 nt

UniGene Fasta

>sp_v3.0_unigene73004
CGTCGTGACCTTGGCTGTCACTCAATCCAGAACAATAATAGTGAAGAACATGAACAAGCATATTCTCCCAGTGAACAGCATCTAAGAGTCCAATTGCCTGACACCGAGAGGTCTACAGTTGAAAGCGAGAGAGAGCAAGAATATTTTGTACCGTGGCATTTACCTTACCACCGTGCAGAGATTAGCGGGGCCTCTGCTTCTGCTATTT

Ace file of the UniGene sp_v3.0_unigene73004

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	S-adenosylmethionine-dependent methyltransferase domain-containing protein [Arabidopsis thaliana] ref\|NP_001031144.1\| S-adenosylmethionine-dependent methyltransferase domain-containing protein [Arabidopsis thaliana] gb\|AAK92706.1\| unknown protein [Arabido	-	-	1.0e-07	48%
FL-Next	tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).	-	-	0.0	48%

Source	Gene names
Sma3	PHYPADRAFT_106932;

Source	GOs	Term	Type	e value	Identity
Sma3	methyltransferase activity	GO:0008168	Molecular Function	0.0	-
Sma3	metabolic process	GO:0008152	Biological Process	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Methyltransferase type 11	IPR013216	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT1G36310.1	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein chr1:13669644-13670934 FORWARD LENGTH=404	3.0e-11	48%
RefSeq	Arabidopsis thaliana	NP_001031144.1	S-adenosylmethionine-dependent methyltransferase domain-containing protein [Arabidopsis thaliana]	3.0e-11	48%
RefSeq	Populus trichocarpa	XP_002302272.1	predicted protein, partial [Populus trichocarpa]	8.0e-15	50%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: D7KM14

Fln msg: Distance to subject end: 62 aas, your sequence is shorter than subject: 69 - 378

Fln protein: RRDLGCHSIQNNNSEEHEQAYSPSEQHLRVQLPDTERSTVESEREQEYFVPWHLPYHRAEISGASASAI

Protein Length: 70

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATCCAGAACAATAATAGTGAAGAACATGAACAAGCATATTCTCCCAGTGAACAGCATCTAAGAGTCCAATTGCCTGACACCGAGAGGTCTACAGTTGAAAGCGAGAGAGAGCAAGAATATTTTGTACCGTGGCATTTACCTTACCACCGTGCAGAGATTAGCGGGGCCTCTGCTTCTGCTATTT

Fln Alignment:

GG46A6U02GYUY6___EQAYSPSEQHLRVQLPDTERSTVESERE--------------QEYFVPWHLPYHRAEISGASASAI
D7KM14_______________ESEESTREQRGESIIPETKASVVEQKDENSVDESLEALKKSQQEYFVPWHLPYHRAEVSGASASAL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain