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UniGene Name: sp_v3.0_unigene72934
Length: 174 nt
 UniGene Fasta
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| >sp_v3.0_unigene72934
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Ace file of the UniGene sp_v3.0_unigene72934
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If you push the Download ace button, you will download an ace file of this UniGene.
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| Annotations |
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| Source | Descriptions | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| AutoFact | Phosphoinositide 3-kinase n=1 Tax=Nicotiana tabacum RepID=Q4QXM0_TOBAC | - | - | 2.0e-19 | 90% |
| FL-Next | sp=Phosphatidylinositol 3-kinase VPS34; Arabidopsis thaliana (Mouse-ear cress). | - | - | 0.0 | 90% |
| Sma3 | Phosphatidylinositol 3-kinase | - | - | 8.28e-15 | - |
| Source | ECs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Phosphatidylinositol 3-kinase. | EC:2.7.1.137 | - | 3.837e-11 | - |
| Source | KEGGs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Inositol phosphate metabolism | 00562 | 3.837e-11 | % | |
| Sma3 | Metabolic pathways | 01100 | 3.837e-11 | % | |
| Sma3 | Phosphatidylinositol signaling system | 04070 | 3.837e-11 | % |
| Source | Gene names |
|---|---|
| Sma3 | At1g60490; CHLREDRAFT_196943; F8A5.4; GSVIVT00002733001; MICPUCDRAFT_42284; MICPUN_88102; OSJNBa0024A05.11; OSJNBa0074N12.38; Os05g0180600; Os08g0307400; OsI_28732; OsJ_17344; OsJ_26836; P0453H11.6; PHYPADRAFT_182554; PI3K; PI3K1; POPTRDRAFT_806443; RCOM_ |
| Source | GOs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | phosphatidylinositol 3-kinase complex | GO:0005942 | Cellular Component | 0.0 | - |
| Sma3 | membrane | GO:0016020 | Cellular Component | 0.0 | - |
| Sma3 | RNA binding | GO:0003723 | Molecular Function | 0.0 | - |
| Sma3 | RNA-directed DNA polymerase activity | GO:0003964 | Molecular Function | 0.0 | - |
| Sma3 | inositol or phosphatidylinositol kinase activity | GO:0004428 | Molecular Function | 0.0 | - |
| Sma3 | binding | GO:0005488 | Molecular Function | 0.0 | - |
| Sma3 | GTP binding | GO:0005525 | Molecular Function | 0.0 | - |
| Sma3 | 1-phosphatidylinositol-3-kinase activity | GO:0016303 | Molecular Function | 0.0 | - |
| Sma3 | phosphotransferase activity, alcohol group as acceptor | GO:0016773 | Molecular Function | 0.0 | - |
| Sma3 | RNA-dependent DNA replication | GO:0006278 | Biological Process | 0.0 | - |
| Sma3 | immune response | GO:0006955 | Biological Process | 0.0 | - |
| Sma3 | antigen processing and presentation | GO:0019882 | Biological Process | 0.0 | - |
| Sma3 | phosphatidylinositol phosphorylation | GO:0046854 | Biological Process | 0.0 | - |
| Sma3 | phosphatidylinositol-mediated signaling | GO:0048015 | Biological Process | 0.0 | - |
| Sma3 | microgametogenesis | GO:0055046 | Biological Process | 0.0 | - |
| Source | InterPros | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | C2 calcium-dependent membrane targeting | IPR000008 | - | 0.0 | - |
| Sma3 | Phosphatidylinositol 3-/4-kinase, catalytic domain | IPR000403 | - | 0.0 | - |
| Sma3 | Reverse transcriptase | IPR000477 | - | 0.0 | - |
| Sma3 | Phosphoinositide 3-kinase, accessory (PIK) domain | IPR001263 | - | 0.0 | - |
| Sma3 | Phosphoinositide 3-kinase, C2 | IPR002420 | - | 0.0 | - |
| Sma3 | Endonuclease/exonuclease/phosphatase | IPR005135 | - | 0.0 | - |
| Sma3 | Small GTPase superfamily, ARF/SAR type | IPR006689 | - | 0.0 | - |
| Sma3 | Phosphatidylinositol 3-kinase, Vps34 type | IPR008290 | - | 0.0 | - |
| Sma3 | Phosphatidylinositol Kinase | IPR015433 | - | 0.0 | - |
| Sma3 | Phosphatidylinositol 3/4-kinase, conserved site | IPR018936 | - | 0.0 | - |
| Source | Species | ID | Description | e value | Identity |
|---|---|---|---|---|---|
| ATG | Arabidoptis thaliana | AT1G60490.1 | ATVPS34, VPS34, PI3K vacuolar protein sorting 34 chr1:22285792-22290190 REVERSE LENGTH=814 | 3.0e-25 | 90% |
| RefSeq | Arabidopsis thaliana | NP_176251.1 | phosphatidylinositol 3-kinase VPS34 [Arabidopsis thaliana] | 4.0e-25 | 90% |
| RefSeq | Populus trichocarpa | XP_002318628.1 | predicted protein [Populus trichocarpa] | 5.0e-24 | 86% |
| Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: sp_plants
Fln subject: P42339
Fln msg: Distance to subject end: 50 aas, your sequence is shorter than subject: 58 - 814
Fln protein:
R
Protein Length:
59
Fln nts:
C
Fln Alignment:
GG46A6U02F6BKS___SMGGAESQYYGRFKSYCCEAYNILRKSSNLILNLFHLMAGASIPAIASDPE
P42339_______________AMGGAESQYYTRFKSYCCEAYNILRKSSNLILNLFHLMAGSTIPDIASDPE
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain
