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UniGene Name: sp_v3.0_unigene72897
Length: 207 nt
 UniGene Fasta
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| >sp_v3.0_unigene72897
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Ace file of the UniGene sp_v3.0_unigene72897
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If you push the Download ace button, you will download an ace file of this UniGene.
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| Annotations |
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| Source | Descriptions | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| AutoFact | pfam07731, Cu-oxidase_2, Multicopper oxidase | - | - | 9.0e-12 | 37% |
| FL-Next | tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). | - | - | 0.0 | 75% |
| Sma3 | Multicopper oxidase, putative | - | - | 5.031e-19 | - |
| Source | ECs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | L-ascorbate oxidase. | EC:1.10.3.3 | - | 1.954e-14 | - |
| Source | KEGGs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Ascorbate and aldarate metabolism | 00053 | 1.954e-14 | % | |
| Sma3 | Metabolic pathways | 01100 | 1.954e-14 | % |
| Source | Gene names |
|---|---|
| Sma3 | AT1G41830; AT1G76160; AT4G38420; AT4g22010; AT4g28090; AT4g38420; At1g21850; At1g21860; At1g41830; At1g55560; At1g55560/T5A14_2; At1g55570; At1g75790; At1g76160; At2g23630; At3g13390; At3g13400; At4g22010; At4g28090; At4g38420; B1148D12.11; Bp10; Bplo; F2 |
| Source | GOs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | extracellular region | GO:0005576 | Cellular Component | 0.0 | - |
| Sma3 | plasma membrane | GO:0005886 | Cellular Component | 0.0 | - |
| Sma3 | plant-type cell wall | GO:0009505 | Cellular Component | 0.0 | - |
| Sma3 | membrane | GO:0016020 | Cellular Component | 0.0 | - |
| Sma3 | apoplast | GO:0048046 | Cellular Component | 0.0 | - |
| Sma3 | copper ion binding | GO:0005507 | Molecular Function | 0.0 | - |
| Sma3 | oxidoreductase activity | GO:0016491 | Molecular Function | 0.0 | - |
| Sma3 | pectinesterase activity | GO:0030599 | Molecular Function | 0.0 | - |
| Sma3 | oxidation-reduction process | GO:0055114 | Biological Process | 0.0 | - |
| Source | InterPros | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Multicopper oxidase, type 1 | IPR001117 | - | 0.0 | - |
| Sma3 | Aminoacyl-tRNA synthetase, class I, conserved site | IPR001412 | - | 0.0 | - |
| Sma3 | Lipocalin | IPR002345 | - | 0.0 | - |
| Sma3 | Cupredoxin | IPR008972 | - | 0.0 | - |
| Sma3 | Multicopper oxidase, type 2 | IPR011706 | - | 0.0 | - |
| Sma3 | Multicopper oxidase, type 3 | IPR011707 | - | 0.0 | - |
| Sma3 | Beta tubulin, autoregulation binding site | IPR013838 | - | 0.0 | - |
| Source | Species | ID | Description | e value | Identity |
|---|---|---|---|---|---|
| ATG | Arabidoptis thaliana | AT1G21850.1 | sks8 SKU5 similar 8 chr1:7667803-7670530 REVERSE LENGTH=551 | 3.0e-19 | 70% |
| RefSeq | Arabidopsis thaliana | NP_173603.1 | SKU5 similar 8 protein [Arabidopsis thaliana] | 4.0e-19 | 70% |
| RefSeq | Populus trichocarpa | XP_002306213.1 | predicted protein [Populus trichocarpa] | 8.0e-21 | 70% |
| Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: coniferopsida.fasta
Fln subject: B8LRP4
Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 40 aas, your sequence is shorter than subject: 51 - 542
Fln protein:
R
Protein Length:
52
Fln nts:
C
Fln Alignment:
GG46A6U02HTF85___FFVVGMERGTWTPASRNGYNLFDAVSRCTTQVYPQSWTAIL*V-*YAGMWNLRSETW
B8LRP4_______________FFVVGMDGGDWTPANRKGYNLFDAVSRCTTQVYPNSWTAVLLTFDNAGLWNLRSQTW
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain
