UniGene Name: sp_v3.0_unigene72785
Length: 216 nt
UniGene Fasta |
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>sp_v3.0_unigene72785
C |
Ace file of the UniGene sp_v3.0_unigene72785 |
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Annotations |
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Source | Descriptions | Term | Type | e value | Identity |
---|---|---|---|---|---|
AutoFact | Phosphoenolpyruvate carboxylase n=6 Tax=Poaceae RepID=Q84XH0_ORYSI | - | - | 2.0e-27 | 87% |
FL-Next | tr=Phosphoenolpyruvate carboxylase; Picea abies (Norway spruce) (Picea excelsa). | - | - | 0.0 | 79% |
Sma3 | Phosphoenolpyruvate carboxylase | - | - | 0.0 | - |
Source | ECs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Oxaloacetate decarboxylase. | EC:4.1.1.3 | - | 1.572e-06 | - |
Source | KEGGs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Arginine and proline metabolism | 00330 | 1.572e-06 | % | |
Sma3 | Pyruvate metabolism | 00620 | 1.572e-06 | % | |
Sma3 | Metabolic pathways | 01100 | 1.572e-06 | % | |
Sma3 | Phosphoenolpyruvate carboxylase. | EC:4.1.1.31 | - | 0.0 | - |
Source | KEGGs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Pyruvate metabolism | 00620 | 0.0 | % | |
Sma3 | Methane metabolism | 00680 | 0.0 | % | |
Sma3 | Carbon fixation in photosynthetic organisms | 00710 | 0.0 | % | |
Sma3 | Carbon fixation pathways in prokaryotes | 00720 | 0.0 | % | |
Sma3 | Metabolic pathways | 01100 | 0.0 | % |
Source | Gene names |
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Sma3 | AT1G53310; At1g53310; At1g68750; At2g42600; At3g14940; B1131G08.12; EhPEPC; F12M16.21; F14K14.14; F14N22.13; F24J5.1; GSVIVT00018735001; GSVIVT00027811001; GSVIVT00030262001; GmPEPC15; GmPEPC7; K15M2.8; LjPEPC1; LjPEPC2; MICPUCDRAFT_31189; MICPUN_104763; |
Source | GOs | Term | Type | e value | Identity |
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Sma3 | cytoplasm | GO:0005737 | Cellular Component | 0.0 | - |
Sma3 | plasma membrane | GO:0005886 | Cellular Component | 0.0 | - |
Sma3 | chloroplast | GO:0009507 | Cellular Component | 0.0 | - |
Sma3 | apoplast | GO:0048046 | Cellular Component | 0.0 | - |
Sma3 | phosphoenolpyruvate carboxylase activity | GO:0008964 | Molecular Function | 0.0 | - |
Sma3 | tricarboxylic acid cycle | GO:0006099 | Biological Process | 0.0 | - |
Sma3 | response to stress | GO:0006950 | Biological Process | 0.0 | - |
Sma3 | carbon fixation | GO:0015977 | Biological Process | 0.0 | - |
Sma3 | photosynthesis | GO:0015979 | Biological Process | 0.0 | - |
Source | InterPros | Term | Type | e value | Identity |
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Sma3 | IPR001449 | - | 0.0 | - | |
Sma3 | Pyruvate/Phosphoenolpyruvate kinase | IPR015813 | - | 0.0 | - |
Sma3 | Phosphoenolpyruvate carboxylase, active site | IPR018129 | - | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
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ATG | Arabidoptis thaliana | AT1G53310.1 | ATPPC1, PEPC1, ATPEPC1, PPC1 phosphoenolpyruvate carboxylase 1 chr1:19884261-19888070 REVERSE LENGTH=967 | 1.0e-32 | 86% |
RefSeq | Arabidopsis thaliana | NP_175738.1 | phosphoenolpyruvate carboxylase 1 [Arabidopsis thaliana] | 2.0e-32 | 86% |
RefSeq | Populus trichocarpa | XP_002330719.1 | predicted protein [Populus trichocarpa] | 2.0e-32 | 86% |
Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: coniferopsida.fasta
Fln subject: Q9SWG7
Fln msg: Distance to subject end: 475 aas, your sequence is shorter than subject: 72 - 955
Fln protein:
R
Protein Length:
73
Fln nts:
C
Fln Alignment:
GG46A6U02JP4WF___GCHSIADGTLLDFLRQVSTFGLSLVKLDIRQESDRHTDALDAITSYLGIGSYREWSEERRQEWLLSEL
Q9SWG7_______________GDQPIADGSLLDFMRQVSTFGLSFVKLDIRQESDRHSDVADAITRHLGIGSYKEWSEEQRQAWLLSEL
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain