SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene72741

Length: 149 nt

UniGene Fasta

>sp_v3.0_unigene72741
CGTCGTGACCTTGGCTGTCACTCAATTGAAATTGTCTGTAGAATGGGTTGCAGCTTCCGATCTTGAAGATGAAGCTGCAAAAGAGAGACCAGACGTTCATGCTTCTGCATGGAAGGTTCTGAAGGGTGTCAGCTGGTGTTCTGGTCCCA

Ace file of the UniGene sp_v3.0_unigene72741

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	CTP synthase-like protein n=3 Tax=Arabidopsis RepID=Q8L6Z9_ARATH	-	-	2.0e-05	63%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	91%

Source	InterPros	Term	Type	Identity
Sma3		IPR000991	-	-
Sma3	CTP synthase	IPR004468	-	-
Sma3	CTP synthase, N-terminal	IPR017456	-	-
Sma3	Glutamine amidotransferase type 1	IPR017926	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LLK6

Fln msg: Distance to subject end: 76 aas, your sequence is shorter than subject: 49 - 445

Fln protein: VVTLAVTQLKLSVEWVAASDLEDEAAKERPDVHASAWKVLKGVSWCSGP

Protein Length: 50

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATTGAAATTGTCTGTAGAATGGGTTGCAGCTTCCGATCTTGAAGATGAAGCTGCAAAAGAGAGACCAGACGTTCATGCTTCTGCATGGAAGGTTCTGAAGGGTGTCAGCTGGTGTTCTGGTCCCA

Fln Alignment:

GG46A6U02II7GH___LKLSVEWVAASDLEDEAAKERPDVHASAWKVLKGVS
B8LLK6_______________LKLSVEWVAASDLEDEAAKERPDVYASAWKVLKGAA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain