SustainPineDB

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Assembly info
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SSRs
Descriptions
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene72688

Length: 151 nt

UniGene Fasta

>sp_v3.0_unigene72688
CGTCGTGACCTTGGCTGTCACTCAACGGGGGAGGCTTGGCGAGTACAGGGAACCTTAGCTGTGTCGAGAAGTATAGGAGATATACACTTGAAACGGTGGATATCAGCAGAACCGGAGATTAGAAAGCTGCCCATTACATCTGACTCTGTAG

Ace file of the UniGene sp_v3.0_unigene72688

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	putative protein phosphatase 2C 14 [Arabidopsis thaliana] sp\|Q9FXE4.2\|P2C14_ARATH RecName: Full=Probable protein phosphatase 2C 14; Short=AtPP2C14; AltName: Full=Protein phosphatase AP2C4 gb\|AEE34702.1\| putative protein phosphatase 2C 14 [Arabidopsis thal	-	-	2.0e-07	70%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	72%

Source	Gene names
Sma3	At1g67820; F12A21.5; GSVIVT00032073001;

Source	GOs	Term	Type	Identity
Sma3	protein serine/threonine phosphatase complex	GO:0008287	Cellular Component	-
Sma3	magnesium ion binding	GO:0000287	Molecular Function	-
Sma3	catalytic activity	GO:0003824	Molecular Function	-
Sma3	protein serine/threonine phosphatase activity	GO:0004722	Molecular Function	-
Sma3	protein dephosphorylation	GO:0006470	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Protein phosphatase 2C, manganese/magnesium aspartate binding site	IPR000222	-	-
Sma3	Protein phosphatase 2C-like	IPR001932	-	-
Sma3		IPR014045	-	-
Sma3	Protein phosphatase 2C	IPR015655	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT1G67820.1	Protein phosphatase 2C family protein chr1:25429882-25431484 FORWARD LENGTH=445	2.0e-11	70%
RefSeq	Arabidopsis thaliana	NP_176948.2	putative protein phosphatase 2C 14 [Arabidopsis thaliana]	3.0e-11	70%
RefSeq	Populus trichocarpa	XP_002325940.1	predicted protein [Populus trichocarpa]	3.0e-13	59%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NNN4

Fln msg: Distance to subject end: 79 aas, your sequence is shorter than subject: 50 - 338

Fln protein: RRDLGCHSTGEAWRVQGTLAVSRSIGDIHLKRWISAEPEIRKLPITSDSV

Protein Length: 51

Fln nts: CGTCGTGACCTTGGCTGTCACTCAACGGGGGAGGCTTGGCGAGTACAGGGAACCTTAGCTGTGTCGAGAAGTATAGGAGATATACACTTGAAACGGTGGATATCAGCAGAACCGGAGATTAGAAAGCTGCCCATTACATCTGACTCTGTAG

Fln Alignment:

GG46A6U02F5BNK___WRVQGTLAVSRSIGDIHLKRWISAEPEIRKLPITSD
A9NNN4_______________WRVQGSLAVSRAIGDLHMKEWITAEPDTRKIEITSD

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain