SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene72683

Length: 160 nt

UniGene Fasta

>sp_v3.0_unigene72683
CGTCGTGACCTTGGCTGTCACTCAAGAAGGATTAAGGTACAGCTCAGTCGGAAAAATGTATTTGGTCGTGACCGTTTCACTTGTCAGTATTGTGGTTCCAAGAATAATTTGACAATTGACCATGTTTTCCTGCTTCTCGGGGAGGAAAATGGATCTGGGA

Ace file of the UniGene sp_v3.0_unigene72683

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Endonuclease, putative n=1 Tax=Ricinus communis RepID=B9SHH8_RICCO	-	-	1.0e-07	73%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	73%

Source	Gene names
Sma3	GSVIVT00025489001; RCOM_1121850;

Source	GOs	Term	Type	e value	Identity
Sma3	nucleic acid binding	GO:0003676	Molecular Function	0.0	-
Sma3	endonuclease activity	GO:0004519	Molecular Function	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	HNH endonuclease	IPR002711	-	0.0	-
Sma3	HNH nuclease	IPR003615	-	0.0	-

Source	Species	ID	Description	e value	Identity
RefSeq	Populus trichocarpa	XP_002319168.1	predicted protein [Populus trichocarpa]	6.0e-11	70%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: D7TI52

Fln msg: Distance to subject end: 72 aas, your sequence is shorter than subject: 53 - 187

Fln protein: RRDLGCHSRRIKVQLSRKNVFGRDRFTCQYCGSKNNLTIDHVFLLLGEENGSG

Protein Length: 54

Fln nts: CGTCGTGACCTTGGCTGTCACTCAAGAAGGATTAAGGTACAGCTCAGTCGGAAAAATGTATTTGGTCGTGACCGTTTCACTTGTCAGTATTGTGGTTCCAAGAATAATTTGACAATTGACCATGTTTTCCTGCTTCTCGGGGAGGAAAATGGATCTGGGA

Fln Alignment:

GG46A6U02FY2RK___RRIKVQLSRKNVFGRDRFTCQYCGSKNNLTIDHV
D7TI52_______________RRIKNNLSRKNIFYRDNFTCQYCSSGENLTVDHV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain