UniGene Name: sp_v3.0_unigene72663
Length: 161 nt
UniGene Fasta |
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>sp_v3.0_unigene72663
G |
Ace file of the UniGene sp_v3.0_unigene72663 |
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Annotations |
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Source | Descriptions | Term | Type | e value | Identity |
---|---|---|---|---|---|
AutoFact | Phenylalanine ammonia lyase (Fragment) n=1 Tax=Arabidopsis thaliana RepID=Q56Z45_ARATH | - | - | 1.0e-11 | 66% |
FL-Next | sp=Phenylalanine ammonia-lyase; Pinus massoniana. | - | - | 0.0 | 61% |
Sma3 | Phenylalanine ammonia-lyase | - | - | 0.0 | - |
Source | ECs | Term | Type | e value | Identity |
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Sma3 | Phenylalanine ammonia-lyase. | EC:4.3.1.24 | - | 0.0 | - |
Source | KEGGs | Term | Type | e value | Identity |
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Sma3 | Phenylalanine metabolism | 00360 | 0.0 | % | |
Sma3 | Nitrogen metabolism | 00910 | 0.0 | % | |
Sma3 | Phenylpropanoid biosynthesis | 00940 | 0.0 | % | |
Sma3 | Biosynthesis of phenylpropanoids | 01061 | 0.0 | % | |
Sma3 | Biosynthesis of alkaloids derived from shikimate pathway | 01063 | 0.0 | % | |
Sma3 | Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid | 01064 | 0.0 | % | |
Sma3 | Biosynthesis of plant hormones | 01070 | 0.0 | % | |
Sma3 | Metabolic pathways | 01100 | 0.0 | % | |
Sma3 | Biosynthesis of secondary metabolites | 01110 | 0.0 | % |
Source | Gene names |
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Sma3 | AT3G53260; At2g37040; At3g53260; DcPAL4; FaPAL1; FaPAL3; FaPAL4; FaPAL5; GSVIVT00013922001; GSVIVT00013923001; GSVIVT00013930001; GSVIVT00013931001; GSVIVT00013937001; GSVIVT00013939001; GSVIVT00013943001; GSVIVT00013947001; GSVIVT00023211001; GlPAL-B; OS |
Source | GOs | Term | Type | e value | Identity |
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Sma3 | cytoplasm | GO:0005737 | Cellular Component | 0.0 | - |
Sma3 | ammonia ligase activity | GO:0016211 | Molecular Function | 0.0 | - |
Sma3 | lyase activity | GO:0016829 | Molecular Function | 0.0 | - |
Sma3 | ammonia-lyase activity | GO:0016841 | Molecular Function | 0.0 | - |
Sma3 | phenylalanine ammonia-lyase activity | GO:0045548 | Molecular Function | 0.0 | - |
Sma3 | L-phenylalanine catabolic process | GO:0006559 | Biological Process | 0.0 | - |
Sma3 | biosynthetic process | GO:0009058 | Biological Process | 0.0 | - |
Sma3 | phenylpropanoid metabolic process | GO:0009698 | Biological Process | 0.0 | - |
Source | InterPros | Term | Type | e value | Identity |
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Sma3 | Aromatic amino acid lyase | IPR001106 | - | 0.0 | - |
Sma3 | Phenylalanine ammonia-lyase | IPR005922 | - | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
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ATG | Arabidoptis thaliana | AT2G37040.1 | PAL1, ATPAL1 PHE ammonia lyase 1 chr2:15557602-15560237 REVERSE LENGTH=725 | 2.0e-16 | 66% |
RefSeq | Arabidopsis thaliana | NP_181241.1 | phenylalanine ammonia-lyase 1 [Arabidopsis thaliana] | 3.0e-16 | 66% |
RefSeq | Populus trichocarpa | XP_002315309.1 | phenylalanine amonnia lyase, partial [Populus trichocarpa] | 2.0e-14 | 60% |
Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: coniferopsida.fasta
Fln subject: C5MR78
Fln msg: Distance to subject end: 42 aas, your sequence is shorter than subject: 53 - 718
Fln protein:
A
Protein Length:
54
Fln nts:
G
Fln Alignment:
GG46A6U02JSGO3___FEEELKAQIVAGVQERRAACEKGTALVPNRIKDCRSYPLYEFVRVELGTSLL
C5MR78_______________FEAELKAQLELQVSLARESYDKGTSPLPNRIQECRSYPLYEFVRNQLGTKLL
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain