SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene72650

Length: 211 nt

UniGene Fasta

>sp_v3.0_unigene72650
CGTCGTGACCTTGGCTGTCACTCAAAAGCTTCGGCCGACATGTCCAGCGTTCTTAACGTAGAAATCGAAGCGGAGCAAATGAGGGCAGAAGAGATTGCGAGGACGGAGCCGGGGTTTGGTTTATTTTCCAGAGCGTTTGCAAGGCGACACGGCTGGCACCTACTGGGCGCTGCAAGCACATGGTTTCTCATCGACATCGTATTCTACAGCC

Ace file of the UniGene sp_v3.0_unigene72650

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Putative phosphate transporter (Fragment) n=1 Tax=Vitis vinifera RepID=A0PGA5_VITVI	-	-	7.0e-15	62%
FL-Next	tr=Putative phosphate transporter; Cryptomeria japonica (Japanese cedar) (Cupressus japonica).	-	-	0.0	56%
Sma3	Phosphate transporter	-	-	5.077e-30	-

Source	Gene names
Sma3	At2g38940; At3g54700; EcPT1; EcPT2; EcPT3; EcPT5; EdPT1; GSVIVT00020254001; GSVIVT00020255001; GSVIVT00028602001; LOC_Os03g04360; LOC_Os03g05620; LOC_Os04g10690; LOC_Os10g30790; LePT1; LePT2; LjPT1; LjPT2; MtPT6; NtPT2; OSIGBa0132G14.3; OSIGBa0132G14.5; O

Source	GOs	Term	Type	Identity
Sma3	vacuole	GO:0005773	Cellular Component	-
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	transporter activity	GO:0005215	Molecular Function	-
Sma3	inorganic phosphate transmembrane transporter activity	GO:0005315	Molecular Function	-
Sma3	symporter activity	GO:0015293	Molecular Function	-
Sma3	transport	GO:0006810	Biological Process	-
Sma3	phosphate ion transport	GO:0006817	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	WW/Rsp5/WWP	IPR001202	-	-
Sma3	Phosphate permease	IPR004738	-	-
Sma3	General substrate transporter	IPR005828	-	-
Sma3	Sugar transporter, conserved site	IPR005829	-	-
Sma3	Major facilitator superfamily	IPR011701	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT2G38940.1	" ATPT2, PHT1;4 phosphate transporter 1;4 chr2:16258500-16260104 FORWARD LENGTH=534"	3.0e-18	60%
RefSeq	Arabidopsis thaliana	NP_181428.1	inorganic phosphate transporter 1-4 [Arabidopsis thaliana]	4.0e-18	60%
RefSeq	Populus trichocarpa	XP_002315705.1	high affinity inorganic phosphate transporter [Populus trichocarpa]	2.0e-18	60%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: Q1XG57

Fln msg: Distance to subject end: 232 aas, your sequence is shorter than subject: 70 - 544

Fln protein: RRDLGCHSKASADMSSVLNVEIEAEQMRAEEIARTEPGFGLFSRAFARRHGWHLLGAASTWFLIDIVFYS

Protein Length: 71

Fln nts: CGTCGTGACCTTGGCTGTCACTCAAAAGCTTCGGCCGACATGTCCAGCGTTCTTAACGTAGAAATCGAAGCGGAGCAAATGAGGGCAGAAGAGATTGCGAGGACGGAGCCGGGGTTTGGTTTATTTTCCAGAGCGTTTGCAAGGCGACACGGCTGGCACCTACTGGGCGCTGCAAGCACATGGTTTCTCATCGACATCGTATTCTACAGCC

Fln Alignment:

GG46A6U02G3IHC___KASADMSSVLNVEIEAEQMRAEEIARTEPGFGLFSRAFARRHGWHLLGAASTWFLIDIVFYS
Q1XG57_______________QAAADMSRVMQVDIEEDRQKIDEIATREPSFGLFSAQFAKRHGLHLLGTTSTWLLLDVAYYS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain