SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene72640

Length: 209 nt

UniGene Fasta

>sp_v3.0_unigene72640
CGTCGTGACCTTGGCTGTCACTCACTTTGCGGTCCTTAAAAGTATTTTCGAGTCTGATCTGCGAGGCATTTTATGTCATGTGAAGACCCCGTGTAGCATCATCCAGACTAAAAAGGACATACTCGTTCCATTAAGCGTGCCATATTACATGCAACGAAACCTTGGAGGAGAGAGCAATTCAGTGCACATACTTGAGATGGATGGCCATG

Ace file of the UniGene sp_v3.0_unigene72640

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	alpha/beta-hydrolase domain-containing protein [Arabidopsis thaliana] gb\|AAF05858.1\|AC011698_9 unknown protein [Arabidopsis thaliana] gb\|AAL36052.1\| AT3g03990/T11I18_10 [Arabidopsis thaliana] gb\|AAM19918.1\| AT3g03990/T11I18_10 [Arabidopsis thaliana] gb\|AE	-	-	4.0e-07	45%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	81%

Source	InterPros	Term	Type	e value	Identity
Sma3	Alpha/beta hydrolase fold-1	IPR000073	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G03990.1	alpha/beta-Hydrolases superfamily protein chr3:1033788-1034591 FORWARD LENGTH=267	4.0e-11	45%
RefSeq	Arabidopsis thaliana	NP_566220.1	alpha/beta-hydrolase domain-containing protein [Arabidopsis thaliana]	5.0e-11	45%
RefSeq	Populus trichocarpa	XP_002320690.1	predicted protein [Populus trichocarpa]	2.0e-14	55%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: C0PS85

Fln msg: Distance to subject end: 21 aas, your sequence is shorter than subject: 69 - 273

Fln protein: VVTLAVTHFAVLKSIFESDLRGILCHVKTPCSIIQTKKDILVPLSVPYYMQRNLGGESNSVHILEMDGH

Protein Length: 70

Fln nts: CGTCGTGACCTTGGCTGTCACTCACTTTGCGGTCCTTAAAAGTATTTTCGAGTCTGATCTGCGAGGCATTTTATGTCATGTGAAGACCCCGTGTAGCATCATCCAGACTAAAAAGGACATACTCGTTCCATTAAGCGTGCCATATTACATGCAACGAAACCTTGGAGGAGAGAGCAATTCAGTGCACATACTTGAGATGGATGGCCATG

Fln Alignment:

GG46A6U02HO8GD___VLKSIFESDLRGILCHVKTPCSIIQTKKDILVPLSVPYYMQRNLGGESNSVHILEMDGH
C0PS85_______________VAKAIFQSDVRNILCDVKTPCSIIQTRKDIAVPLSVPYYMQRNLGGEKNSVHILDTDGH

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain