SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene72614

Length: 233 nt

UniGene Fasta

>sp_v3.0_unigene72614
CGTCGTGACCTTGGCTGTCACTCAAGATCTGGCTCGAGAAGAGATGATGTTTAGGATAATGTTTAATACGTCATTTGTACGATCCAATATTTTGATGTTAAACCGGGATGACATTGATATTCTCTGGAATGCCAAAGACCGTTTTCCAAAGGATTTCAGAGCAGAGGTGCTTTTCTCTGATATGGATGCTTCATCTTCTCCTCTACTTAATGTTGCAACACTTGGTGGAGAGG

Ace file of the UniGene sp_v3.0_unigene72614

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	PTEN_C2 domain containing protein	-	-	2.0e-19	42%
FL-Next	sp=Formin-like protein 6; Oryza sativa subsp. japonica (Rice).	-	-	0.0	73%

Source	Gene names
Sma3	At1g31810; At2g25050; At5g07740/At5g07750; At5g58160; F27C12.3; F5M6.18; FH13; FH14; FH18; FH20; FH3; FH5; FH6; GSVIVT00003176001; GSVIVT00013333001; GSVIVT00016289001; GSVIVT00032770001; LOC_Os07g40510/LOC_Os07g40520; LOC_Os08g17820; LOC_Os10g02980; MBK2

Source	GOs	Term	Type	Identity
Sma3	actin binding	GO:0003779	Molecular Function	-
Sma3	phosphoprotein phosphatase activity	GO:0004721	Molecular Function	-
Sma3	cellular component organization	GO:0016043	Biological Process	-
Sma3	actin cytoskeleton organization	GO:0030036	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Phosphotransferase system, HPr serine phosphorylation site	IPR002114	-	-
Sma3	Actin-binding FH2/DRF autoregulatory	IPR003104	-	-
Sma3	Outer membrane autotransporter barrel	IPR006315	-	-
Sma3	Tensin phosphatase, C2 domain	IPR014020	-	-
Sma3	Actin-binding FH2	IPR015425	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G58160.1	actin binding chr5:23533724-23539465 FORWARD LENGTH=1324	3.0e-22	61%
RefSeq	Arabidopsis thaliana	NP_200624.5	formin-like protein 13 [Arabidopsis thaliana]	4.0e-22	61%
RefSeq	Populus trichocarpa	XP_002324543.1	predicted protein, partial [Populus trichocarpa]	6.0e-26	69%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q6ZCX3

Fln msg: Distance to subject end: 1010 aas, your sequence is shorter than subject: 77 - 1364

Fln protein: VVTLAVTQDLAREEMMFRIMFNTSFVRSNILMLNRDDIDILWNAKDRFPKDFRAEVLFSDMDASSSPLLNVATLGGE

Protein Length: 78

Fln nts: CGTCGTGACCTTGGCTGTCACTCAAGATCTGGCTCGAGAAGAGATGATGTTTAGGATAATGTTTAATACGTCATTTGTACGATCCAATATTTTGATGTTAAACCGGGATGACATTGATATTCTCTGGAATGCCAAAGACCGTTTTCCAAAGGATTTCAGAGCAGAGGTGCTTTTCTCTGATATGGATGCTTCATCTTCTCCTCTACTTAATGTTGCAACACTTGGTGGAGAGG

Fln Alignment:

GG46A6U02GO4UR___LAVTQDLAREEMMFRIMFNTSFVRSNILMLNRDDIDILWNAKDRFPKDFRAEVLFSDMDA
Q6ZCX3_______________ISLDADQQREEMIFRVMFNTAFIRSNILMLNRDEIDILWDAKDRFPKEFRAEVLFSEMDS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain