SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene72557

Length: 217 nt

UniGene Fasta

>sp_v3.0_unigene72557
CGTCGTGACCTTGGCTGTCACTCAATCGTGGCCCTTCTTTGCAGAGCAGCAGACTAACCGGAGATTTGTTAGTGAAGTTTGGAAGATTGGGATGGAGATGAAAGAAGTTGTGAGGAGAGAAGATGTTGAGAAAATGGTGAGGATGTTGATGAGAGGGGAAGAAGGGCGGCAAATGAAGATGAGAATTGAGAGGTTGAGAGATGCGGCGTTCAGAGCA

Ace file of the UniGene sp_v3.0_unigene72557

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	UDP-glucosyltransferase family protein (Fragment) n=6 Tax=Pseudotsuga RepID=C6F8W3_PSEMZ	-	-	6.0e-17	68%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	75%

Source	GOs	Term	Type	e value	Identity
Sma3	transferase activity, transferring hexosyl groups	GO:0016758	Molecular Function	0.0	-
Sma3	metabolic process	GO:0008152	Biological Process	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	UDP-glucuronosyl/UDP-glucosyltransferase	IPR002213	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT1G22370.2	AtUGT85A5, UGT85A5 UDP-glucosyl transferase 85A5 chr1:7898116-7899879 REVERSE LENGTH=479	1.0e-14	47%
RefSeq	Arabidopsis thaliana	NP_564170.1	UDP-glucosyl transferase 85A5 [Arabidopsis thaliana]	7.0e-15	47%
RefSeq	Populus trichocarpa	XP_002308829.1	predicted protein [Populus trichocarpa]	3.0e-14	49%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NVD1

Fln msg: Distance to subject end: 25 aas, your sequence is shorter than subject: 72 - 298

Fln protein: VVTLAVTQSWPFFAEQQTNRRFVSEVWKIGMEMKEVVRREDVEKMVRMLMRGEEGRQMKMRIERLRDAAFRA

Protein Length: 73

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATCGTGGCCCTTCTTTGCAGAGCAGCAGACTAACCGGAGATTTGTTAGTGAAGTTTGGAAGATTGGGATGGAGATGAAAGAAGTTGTGAGGAGAGAAGATGTTGAGAAAATGGTGAGGATGTTGATGAGAGGGGAAGAAGGGCGGCAAATGAAGATGAGAATTGAGAGGTTGAGAGATGCGGCGTTCAGAGCA

Fln Alignment:

GG46A6U02JDZ73___SWPFFAEQQTNRRFVSEVWKIGMEMKEVVRREDVEKMVRMLMRGEEGRQMKMRIERLRDAAFRA
A9NVD1_______________SWPFLAEQPTNRRFVSGVWNIGMAMNEVVRREDVEDMVRRLMNGEEGRQMRKRIGELRDESMRA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain