UniGene Name: sp_v3.0_unigene72450
Length: 196 nt
UniGene Fasta |
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>sp_v3.0_unigene72450
C |
Ace file of the UniGene sp_v3.0_unigene72450 |
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Annotations |
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Source | Descriptions | Term | Type | e value | Identity |
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AutoFact | NADH dehydrogenase subunit 5 (Fragment) n=2 Tax=Cucumis sativus RepID=Q7YB09_CUCSA | - | - | 6.0e-14 | 89% |
FL-Next | sp=NADH-ubiquinone oxidoreductase chain 5; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. | - | - | 0.0 | 60% |
Sma3 | NADH-ubiquinone oxidoreductase chain 5 | - | - | 3.94e-09 | - |
Source | ECs | Term | Type | e value | Identity |
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Sma3 | NADH dehydrogenase (ubiquinone). | EC:1.6.5.3 | - | 2.688e-07 | - |
Source | KEGGs | Term | Type | e value | Identity |
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Sma3 | Oxidative phosphorylation | 00190 | 2.688e-07 | % | |
Sma3 | Metabolic pathways | 01100 | 2.688e-07 | % |
Source | Gene names |
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Sma3 | NAD5; NADH5; ND5; Nad5; nad5; nad5 gene; nadh dehydrogenase subunit 5; nd5; orf399; |
Source | GOs | Term | Type | e value | Identity |
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Sma3 | mitochondrion | GO:0005739 | Cellular Component | 0.0 | - |
Sma3 | mitochondrial inner membrane | GO:0005743 | Cellular Component | 0.0 | - |
Sma3 | mitochondrial respiratory chain | GO:0005746 | Cellular Component | 0.0 | - |
Sma3 | integral to membrane | GO:0016021 | Cellular Component | 0.0 | - |
Sma3 | NADH dehydrogenase (ubiquinone) activity | GO:0008137 | Molecular Function | 0.0 | - |
Sma3 | transport | GO:0006810 | Biological Process | 0.0 | - |
Sma3 | ATP synthesis coupled electron transport | GO:0042773 | Biological Process | 0.0 | - |
Source | InterPros | Term | Type | e value | Identity |
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Sma3 | Protease inhibitor I4, serpin | IPR000215 | - | 0.0 | - |
Sma3 | NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal | IPR001516 | - | 0.0 | - |
Sma3 | NADH:ubiquinone/plastoquinone oxidoreductase | IPR001750 | - | 0.0 | - |
Sma3 | IPR003916 | - | 0.0 | - | |
Sma3 | NADH-plastoquinone oxidoreductase, chain 5 | IPR003945 | - | 0.0 | - |
Sma3 | NADH dehydrogenase subunit 5, C-terminal | IPR010934 | - | 0.0 | - |
Sma3 | NADH-plastoquinone oxidoreductase, chain 5 subgroup | IPR018393 | - | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
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ATG | Arabidoptis thaliana | ATMG00665.1 | NAD5B, NAD5.2, NAD5 NADH dehydrogenase 5B chrM:190740-190761 REVERSE LENGTH=669 | 1.0e-11 | 73% |
RefSeq | Arabidopsis thaliana | NP_085478.1 | NADH dehydrogenase subunit 5 (mitochondrion) [Arabidopsis thaliana] | 2.0e-11 | 73% |
RefSeq | Populus trichocarpa | XP_002333105.1 | predicted protein [Populus trichocarpa] | 2.0e-11 | 72% |
Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: sp_plants
Fln subject: P29388
Fln msg: ERROR#3, very serious frame error, Overlapping hits, possible frame ERROR between 169 and 66, Distance to subject end: 468 aas, your sequence is shorter than subject: 65 - 669
Fln protein:
V
Protein Length:
66
Fln nts:
C
Fln Alignment:
GG46A6U02JVVUA___LASYLLINFWFTRLKADKAAxxxxxxxxxxxxxxxxxxxxxxxxxxxxFTLFQTVDFSTIFAC
P29388_______________LASYLLIHFWFTRLQADKAAxxxxxxxxxxxxxxxxxxxxxxxxxxxxFTLFQTVDFSTIFAC
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain