SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene72226

Length: 187 nt

UniGene Fasta

>sp_v3.0_unigene72226
CGTCGTGACCTTGGCTGTCACTCAGTGTTACAGATCTTGCAATCGTTTATTTTGTTCGTCCCACCCATATCTCTGAACACCGGAAGAATAGCAATGGATGGTTATGAGAAAATGGATAAAGTGGGAGAAGGAACTTATGGGAAGGTGTACATGGCCAGGGACAAGAAAACGGGGCAACTGGTCGCCC

Ace file of the UniGene sp_v3.0_unigene72226

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	cyclin dependent kinase B [Camellia sinensis]	-	-	1.0e-06	77%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	80%

Source	Gene names
Sma3	13; CDKB2-1; CdkB1; CdkB1-1; CdkB1-2; LOC_Os08g40170; Os08g0512600; OsI_29856; OsJ_27911; P0711H09.13; PHYPADRAFT_107101; PHYPADRAFT_227111; PHYPADRAFT_60060; POPTRDRAFT_577241; POPTRDRAFT_748306; SS224; cdkB1; cdkb;

Source	GOs	Term	Type	Identity
Sma3	nucleus	GO:0005634	Cellular Component	-
Sma3	cytoplasm	GO:0005737	Cellular Component	-
Sma3	spindle	GO:0005819	Cellular Component	-
Sma3	protein serine/threonine kinase activity	GO:0004674	Molecular Function	-
Sma3	cyclin-dependent protein kinase activity	GO:0004693	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	RNA polymerase II carboxy-terminal domain kinase activity	GO:0008353	Molecular Function	-
Sma3	protein phosphorylation	GO:0006468	Biological Process	-
Sma3	mitosis	GO:0007067	Biological Process	-
Sma3	cell division	GO:0051301	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: D5AAZ1

Fln msg: Distance to subject end: 271 aas, your sequence is shorter than subject: 31 - 302

Fln protein: MDGYEKMDKVGEGTYGKVYMARDKKTGQLVA

Protein Length: 32

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGTGTTACAGATCTTGCAATCGTTTATTTTGTTCGTCCCACCCATATCTCTGAACACCGGAAGAATAGCA_-_ATGGATGGTTATGAGAAAATGGATAAAGTGGGAGAAGGAACTTATGGGAAGGTGTACATGGCCAGGGACAAGAAAACGGGGCAACTGGTCGCCC

Fln Alignment:

GG46A6U02F8SL8___MDGYEKMDKVGEGTYGKVYMARDKKTGQLVA
D5AAZ1_______________MDSYEKLEKVGEGTYGKVYKAKDKKTGKLVA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain