SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene72167

Length: 164 nt

UniGene Fasta

>sp_v3.0_unigene72167
TGGTATTACTTTTCAAGTTGATGCATCGATGGACTTAGCATTGCAGGAATTAGCCAAGCGAATATTGCCTTTGTGCGAGAACTATATTATAATTAATCTATATGTAGAGTCAAGGTCGCACTTCAAGCATGGGTTGTCAATCATGCATTTGCTGCTGCACTGAG

Ace file of the UniGene sp_v3.0_unigene72167

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	75%

Source	Gene names
Sma3	At5g17410; GSVIVT00020711001; POPTRDRAFT_833741; RCOM_1158460; T10B6_70; TUBGCP4;

Source	GOs	Term	Type	Identity
Sma3	spindle pole	GO:0000922	Cellular Component	-
Sma3	microtubule organizing center	GO:0005815	Cellular Component	-
Sma3	microtubule cytoskeleton organization	GO:0000226	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Spc97/Spc98	IPR007259	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G17410.2	-	3.0e-14	72%
RefSeq	Arabidopsis thaliana	NP_568346.1	Spc97 / Spc98 family of spindle pole body (SBP) component [Arabidopsis thaliana]	4.0e-14	72%
RefSeq	Populus trichocarpa	XP_002316177.1	tubulin gamma complex-associated protein [Populus trichocarpa]	2.0e-15	72%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: D7TWM3

Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 559 aas, your sequence is shorter than subject: 54 - 702

Fln protein: GITFQVDASMDLALQELAKRILPLCENYIIINLYVESRSHFKHGLSIMHLLLH*

Protein Length: 55

Fln nts: TGGTATTACTTTTCAAGTTGATGCATCGATGGACTTAGCATTGCAGGAATTAGCCAAGCGAATATTGCCTTTGTGCGAGAACTATATTATAATTAATCTATATGTAGAGTCAAGGTCGCACTTCAAGCATGGGTTGTCAATCATGCATTTGCTGCTGCACTGAG

Fln Alignment:

GG46A6U02GFOXM___ITFQVDASMDLALQELAKRILPLCENYIIINLYVESRSHFKHGL
D7TWM3_______________VTFQIDASMDLALQELAKRIFPLCESFLLINQFVESRSQFKTGL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain