SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene72144

Length: 184 nt

UniGene Fasta

>sp_v3.0_unigene72144
CGTCGTGACCTTGGCTGTCACTCATGGTATGGTTGGCTGTCTTGCCTCCATCGAAAGACCTGAACTGTTTGAAAGATTAATCTTGCTCTGCGCTTCGCCAAGATATCTGAATGATGAATCCTACCAGGGAGGATTCGAACGTGGGGAAGTTGATAGTTTTTACTGTGCCATGAAATCTGACTAT

Ace file of the UniGene sp_v3.0_unigene72144

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	alpha/beta-hydrolase domain-containing protein [Arabidopsis thaliana] gb\|AAF05858.1\|AC011698_9 unknown protein [Arabidopsis thaliana] gb\|AAL36052.1\| AT3g03990/T11I18_10 [Arabidopsis thaliana] gb\|AAM19918.1\| AT3g03990/T11I18_10 [Arabidopsis thaliana] gb\|AE	-	-	3.0e-11	57%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	92%

Source	Gene names
Sma3	PHYPADRAFT_162425; PHYPADRAFT_58222;

Source	InterPros	Term	Type	e value	Identity
Sma3	Alpha/beta hydrolase fold-1	IPR000073	-	0.0	-
Sma3	GPCR, rhodopsin-like, 7TM	IPR000276	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G03990.1	alpha/beta-Hydrolases superfamily protein chr3:1033788-1034591 FORWARD LENGTH=267	2.0e-16	57%
RefSeq	Arabidopsis thaliana	NP_566220.1	alpha/beta-hydrolase domain-containing protein [Arabidopsis thaliana]	3.0e-16	57%
RefSeq	Populus trichocarpa	XP_002320690.1	predicted protein [Populus trichocarpa]	5.0e-16	59%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NLT8

Fln msg: Distance to subject end: 128 aas, your sequence is shorter than subject: 61 - 281

Fln protein: VVTLAVTHGMVGCLASIERPELFERLILLCASPRYLNDESYQGGFERGEVDSFYCAMKSDY

Protein Length: 62

Fln nts: CGTCGTGACCTTGGCTGTCACTCATGGTATGGTTGGCTGTCTTGCCTCCATCGAAAGACCTGAACTGTTTGAAAGATTAATCTTGCTCTGCGCTTCGCCAAGATATCTGAATGATGAATCCTACCAGGGAGGATTCGAACGTGGGGAAGTTGATAGTTTTTACTGTGCCATGAAATCTGACTAT

Fln Alignment:

GG46A6U02ISF4F___GMVGCLASIERPELFERLILLCASPRYLNDESYQGGFERGEVDSFYCAMKSDY
A9NLT8_______________GMVGCLASIERPELFERLILLCASPRYLNDESYHGGFERGEIDRLYCAMKSDY

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain