SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene71732

Length: 158 nt

UniGene Fasta

>sp_v3.0_unigene71732
TGTATCGACCTTGGCTGTCACTCATTTCTTCATTGATCGGCACCGTTCTTGGAACTGCTTCAAGGATACCATGTGAAGTGCTCAAGCAGAGACTACAGGCTGGTATCTTTGATAATGTTGGAGCTGCGATTGTTGGTACGTGGGAGCAAGATGGGCTG

Ace file of the UniGene sp_v3.0_unigene71732

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	putative mitochondrial carrier protein [Arabidopsis thaliana]	-	-	5.0e-12	77%
FL-Next	tr=Predicted protein; subsp. trichocarpa).	-	-	0.0	82%
Sma3	Putative mitochondrial carrier protein	-	-	4.483e-09	-

Source	Gene names
Sma3	At2g26360; At2g26360/T9J22.3; At2g35800; GSVIVT00018239001; LOC_Os11g01270; LOC_Os12g01240; Os11g0103700; Os12g0103000; OsI_37129; OsJ_32642; OsJ_34901; PHYPADRAFT_182927; PHYPADRAFT_20805; POPTRDRAFT_765330; POPTRDRAFT_833847; RCOM_0713440;

Source	GOs	Term	Type	Identity
Sma3	mitochondrial inner membrane	GO:0005743	Cellular Component	-
Sma3	chloroplast envelope	GO:0009941	Cellular Component	-
Sma3	membrane	GO:0016020	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	binding	GO:0005488	Molecular Function	-
Sma3	calcium ion binding	GO:0005509	Molecular Function	-
Sma3	transport	GO:0006810	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3		IPR001993	-	-
Sma3	Mitochondrial carrier protein	IPR002067	-	-
Sma3	EF-hand-like domain	IPR011992	-	-
Sma3	Mitochondrial substrate/solute carrier	IPR018108	-	-
Sma3	EF-Hand 1, calcium-binding site	IPR018247	-	-
Sma3	EF-hand	IPR018248	-	-
Sma3	EF-HAND 2	IPR018249	-	-
Sma3	Ribosomal protein L29, conserved site	IPR018254	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT2G35800.1	mitochondrial substrate carrier family protein chr2:15044437-15048352 FORWARD LENGTH=823	2.0e-16	77%
RefSeq	Arabidopsis thaliana	NP_850252.1	mitochondrial substrate carrier family protein [Arabidopsis thaliana]	2.0e-16	77%
RefSeq	Populus trichocarpa	XP_002316345.1	predicted protein [Populus trichocarpa]	9.0e-19	82%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B9HU26

Fln msg: Distance to subject end: 136 aas, your sequence is shorter than subject: 52 - 798

Fln protein: YRPWLSLISSLIGTVLGTASRIPCEVLKQRLQAGIFDNVGAAIVGTWEQDGL

Protein Length: 53

Fln nts: TGTATCGACCTTGGCTGTCACTCATTTCTTCATTGATCGGCACCGTTCTTGGAACTGCTTCAAGGATACCATGTGAAGTGCTCAAGCAGAGACTACAGGCTGGTATCTTTGATAATGTTGGAGCTGCGATTGTTGGTACGTGGGAGCAAGATGGGCTG

Fln Alignment:

GG46A6U02JOPH0___ISSLIGTVLGTASRIPCEVLKQRLQAGIFDNVGAAIVGTWEQDGL
B9HU26_______________VASLCSTVLGTAVRIPCEVLKQRLQAGLFDNVGQAIVGTWQQDGL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain