SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene71701

Length: 293 nt

UniGene Fasta

>sp_v3.0_unigene71701
CGTCGTGACCTTGGCTGTCACTCAACTTTACAGTGGTGGGTTCCTTCTTCGTTTCGGACGTTACCAACATGGGCTTCAGAGATGTGGACTTCGGTTGGGGGAGGGCAGCCTACGGAGGACCTGCACAAAGTGGAGTGGGTGTAGTGCCGGGCATCATCAACTTCTTCATCGCTGCTCGTAATACAAGCGGCGTGGAGGGAATAGTGTTTCCCATTTGCTTGACCTCTGCTGCCATGAGACGATTTGAAGCAGGAATCGGTGATGCGCCGATGGAGCACACTCACCCTTTTCCA

Ace file of the UniGene sp_v3.0_unigene71701

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Putative acyltransferase n=1 Tax=Clitoria ternatea RepID=A4F1S1_CLITE	-	-	2.0e-21	53%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	67%
Sma3	Benzoyl coenzyme A: benzyl alcohol benzoyl transferase	-	-	2.039e-09	-

Source	Gene names
Sma3	AAT3; CtAT23; GSVIVT00013875001; LOC_Os10g35950; OSJNBb0073N24.11; Os10g0503300; OsI_34226; OsJ_32078; PhBEBT1; hsr201;

Source	GOs	Term	Type	e value	Identity
Sma3		GO:0008415	Molecular Function	0.0	-
Sma3	transferase activity, transferring acyl groups other than amino-acyl groups	GO:0016747	Molecular Function	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Transferase	IPR003480	-	0.0	-

Source	Species	ID	Description	e value	Identity
RefSeq	Populus trichocarpa	XP_002325454.1	predicted protein [Populus trichocarpa]	2.0e-21	51%

Full-Lengther Next Prediction

Fln status: Putative C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LLR5

Fln msg: Unexpected stop codon in the beginning of your sequence, STOP codon was not found. Distance to subject end: 4 aas, your sequence is shorter than subject: 97 - 448

Fln protein: S*PWLSLNFTVVGSFFVSDVTNMGFRDVDFGWGRAAYGGPAQSGVGVVPGIINFFIAARNTSGVEGIVFPICLTSAAMRRFEAGIGDAPMEHTHPFP

Protein Length: 98

Fln nts: CGTCGTGACCTTGGCTGTCACTCAACTTTACAGTGGTGGGTTCCTTCTTCGTTTCGGACGTTACCAACATGGGCTTCAGAGATGTGGACTTCGGTTGGGGGAGGGCAGCCTACGGAGGACCTGCACAAAGTGGAGTGGGTGTAGTGCCGGGCATCATCAACTTCTTCATCGCTGCTCGTAATACAAGCGGCGTGGAGGGAATAGTGTTTCCCATTTGCTTGACCTCTGCTGCCATGAGACGATTTGAAGCAGGAATCGGTGATGCGCCGATGGAGCACACTCACCCTTTTCCA

Fln Alignment:

GG46A6U02JJR19___NFTVVGSFFVSDVTNMGFRDVDFGWGRAAYGGPAQSGVGVVPGIINFFIAARNTSGVEGIVFPICLTSAAMRRFEAGIGDAPMEHTHPF
B8LLR5_______________HFTVVGSFLVSDVTKIGFGDVDFGWGRAAYGGPAKGGVGAVPGVSSFFIPLRNTSGVEGILVPVCLPSAAMKIFQAEISEATEKYAPPF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain