SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene71589

Length: 176 nt

UniGene Fasta

>sp_v3.0_unigene71589
CGTCGTGACCTTGGCTGTCACTCATGTGCCGCTGGAGGGTGTGTCTGCATGCATGGGAATTTATGGAAGAGGGGCATATCCCGGGTATGCAGGCCAGCTCCTGGTAGATGAAACTACAGGAGCCAGCTTCAATGCTCTAGGGATCAATGGCCGCATGTTCCTCCTTCCAGCCATGT

Ace file of the UniGene sp_v3.0_unigene71589

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Phosphate-responsive protein (Fragment) n=4 Tax=Pseudotsuga RepID=C6FC96_PSEMZ	-	-	3.0e-18	89%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	89%
Sma3	Putative phi-1	-	-	2.553e-14	-

Source	Gene names
Sma3	AT4g08950; At1g35140; At4g08950; At4g08950/T3H13.3; At5g09440; At5g09440/T5E8_240; At5g64260; EXO; GSVIVT00006171001; GSVIVT00015200001; GSVIVT00015201001; GSVIVT00015203001; GSVIVT00015204001; GSVIVT00015212001; GSVIVT00015213001; GSVIVT00028047001; Os02

Source	GOs	Term	Type	e value	Identity
Sma3	plant-type cell wall	GO:0009505	Cellular Component	0.0	-
Sma3	membrane	GO:0016020	Cellular Component	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Phosphate-induced protein 1	IPR006766	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT4G08950.1	EXO Phosphate-responsive 1 family protein chr4:5740378-5741322 FORWARD LENGTH=314	9.0e-21	72%
RefSeq	Arabidopsis thaliana	NP_192634.1	Phosphate-responsive 1 family protein [Arabidopsis thaliana]	1.0e-20	72%
RefSeq	Populus trichocarpa	XP_002307366.1	predicted protein [Populus trichocarpa]	2.0e-21	72%

Full-Lengther Next Prediction

Fln status: Putative C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9P1J7

Fln msg: STOP codon was not found. Distance to subject end: 12 aas, your sequence is shorter than subject: 58 - 330

Fln protein: VVTLAVTHVPLEGVSACMGIYGRGAYPGYAGQLLVDETTGASFNALGINGRMFLLPAM

Protein Length: 59

Fln nts: CGTCGTGACCTTGGCTGTCACTCATGTGCCGCTGGAGGGTGTGTCTGCATGCATGGGAATTTATGGAAGAGGGGCATATCCCGGGTATGCAGGCCAGCTCCTGGTAGATGAAACTACAGGAGCCAGCTTCAATGCTCTAGGGATCAATGGCCGCATGTTCCTCCTTCCAGCCATGT

Fln Alignment:

GG46A6U02G8SRD___PLEGVSACMGIYGRGAYPGYAGQLLVDETTGASFNALGINGRMFLLPAM
A9P1J7_______________PLEGVSACGGMYGRGAYPGYAGQLLGDETTGASFNARGLNGRMFLLPAM

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain