SustainPineDB

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Assembly info
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SSRs
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene71435

Length: 200 nt

UniGene Fasta

>sp_v3.0_unigene71435
CGTCGTGACCTTGGCTGTCACTCAACCTGTATACCCAAACACTGGGCTACAAAATTCACGATATTGAGGCTAAGTACTATGCTGATGGCGAGGATGCCTATGATATGCGCAAACAGCTGAGAGTGAAGTCTGATGGTAAGCATCATCATCATCATCATCATCATTCTGGAGTGTGCTGTGGCGGAGACGGTGGCGATGGG

Ace file of the UniGene sp_v3.0_unigene71435

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	88%
Sma3	Silencing group B protein	-	-	4.556e-12	-

Source	Gene names
Sma3	At5g13780; CHLREDRAFT_95444; GSVIVT00028699001; H0410G08.10; MXE10.5; NAT1; OSJNBa0043L09.27; Os04g0635800; OsI_17581; OsI_17596; OsJ_16314; PHYPADRAFT_197972; POPTRDRAFT_641307; POPTRDRAFT_650021; RCOM_0962820; SGB901; SGB902; VITISV_013774; sgb101;

Source	GOs	Term	Type	Identity
Sma3	N-acetyltransferase activity	GO:0008080	Molecular Function	-
Sma3	transferase activity	GO:0016740	Molecular Function	-
Sma3	pyridoxal phosphate binding	GO:0030170	Molecular Function	-
Sma3	metabolic process	GO:0008152	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	GNAT domain	IPR000182	-	-
Sma3	Aluminium resistance	IPR009651	-	-
Sma3	Pyridoxal phosphate-dependent transferase, major region, subdomain 1	IPR015421	-	-
Sma3	Acyl-CoA N-acyltransferase	IPR016181	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G13780.1	Acyl-CoA N-acyltransferases (NAT) superfamily protein chr5:4447610-4448603 REVERSE LENGTH=192	8.0e-15	80%
RefSeq	Arabidopsis thaliana	NP_196882.1	peptide alpha-N-acetyltransferase [Arabidopsis thaliana]	1.0e-14	80%
RefSeq	Populus trichocarpa	XP_002314058.1	silencing group B protein [Populus trichocarpa]	2.0e-16	85%

Full-Lengther Next Prediction

Fln status: Putative C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NSV4

Fln msg: Unexpected stop codon in the beginning of your sequence, STOP codon was not found. Distance to subject end: 14 aas, your sequence is shorter than subject: 66 - 192

Fln protein: S*PWLSLNLYTQTLGYKIHDIEAKYYADGEDAYDMRKQLRVKSDGKHHHHHHHHSGVCCGGDGGDG

Protein Length: 67

Fln nts: CGTCGTGACCTTGGCTGTCACTCAACCTGTATACCCAAACACTGGGCTACAAAATTCACGATATTGAGGCTAAGTACTATGCTGATGGCGAGGATGCCTATGATATGCGCAAACAGCTGAGAGTGAAGTCTGATGGTAAGCATCATCATCATCATCATCATCATTCTGGAGTGTGCTGTGGCGGAGACGGTGGCGATGGG

Fln Alignment:

GG46A6U02JQMX2___SLNLYTQTLGYKIHDIEAKYYADGEDAYDMRKQLR
A9NSV4_______________AFHLYTQTLGYKIHDIEAKYYADGEDAYDMRKQLK

SSRs (tot: 1)

Start position	End position	Sequence	Length
141	164	CAT CAT CAT CAT CAT CAT CAT CAT	24

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain