SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene71318

Length: 213 nt

UniGene Fasta

>sp_v3.0_unigene71318
CGTCGTGACCTTGGCTGTCACTCATTTGGATCCGTATTTAAAGGAATTTTACCAGATAACAGAGAGGTTGCAGTGAAAAGACTGTATATTAGTTCAAGGCAGGGAGACGCTGAATTTCTGAATGAAACAATCTCATCAATCGTATTCAGCACAGGATCTTGTGAAATTGCTTGGTGCTCCGTTGAAAACTCGGAAAGGCTACTGGTTTACGAA

Ace file of the UniGene sp_v3.0_unigene71318

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	putative S-locus protein kinase [Arabidopsis thaliana] sp\|O64776.2\|Y1144_ARATH RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At1g61440; Flags: Precursor gb\|AEE33838.1\| putative S-locus protein kinase [Arabidopsis thaliana]	-	-	2.0e-08	49%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	63%

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Gnk2-homologous domain	IPR002902	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT1G61440.1	S-locus lectin protein kinase family protein chr1:22669245-22672323 REVERSE LENGTH=792	5.0e-12	49%
RefSeq	Arabidopsis thaliana	NP_176339.1	putative S-locus protein kinase [Arabidopsis thaliana]	7.0e-12	49%
RefSeq	Populus trichocarpa	XP_002336757.1	predicted protein, partial [Populus trichocarpa]	9.0e-13	47%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LLJ5

Fln msg: Distance to subject end: 94 aas, your sequence is shorter than subject: 71 - 505

Fln protein: RRDLGCHSFGSVFKGILPDNREVAVKRLYISSRQGDAEFLNETISSIVFSTGSCEIAWCSVENSERLLVYE

Protein Length: 72

Fln nts: CGTCGTGACCTTGGCTGTCACTCATTTGGATCCGTATTTAAAGGAATTTTACCAGATAACAGAGAGGTTGCAGTGAAAAGACTGTATATTAGTTCAAGGCAGGGAGACGCTGAATTTCTGAATGAAACAATCTCATCAATCGTATTCAGCACAGGATCTTGTGAAATTGCTTGGTGCTCCGTTGAAAACTCGGAAAGGCTACTGGTTTACGAA

Fln Alignment:

GG46A6U02HO90A___LGCHSFGSVFKGILPDNREVAVKRLYISSRQGDAEFLNE-TISSIVFSTGSCEIAWCSVENSERLLVYE
B8LLJ5_______________LGEGGFGSVFKGVLPDGREIAVKRLSIGSRQGDVEFFNEANLISRVQHRNLVKLLGCSVENSERLLVYE

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain