UniGene Name: sp_v3.0_unigene71101
Length: 244 nt
UniGene Fasta |
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>sp_v3.0_unigene71101
C |
Ace file of the UniGene sp_v3.0_unigene71101 |
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Annotations |
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Source | Descriptions | Term | Type | e value | Identity |
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AutoFact | Glycosyl hydrolase-like protein (Fragment) n=13 Tax=Picea sitchensis RepID=E0ZH83_PICSI | - | - | 4.0e-32 | 93% |
FL-Next | tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). | - | - | 0.0 | 95% |
Sma3 | Beta-D-glucan exohydrolase-like protein | - | - | 4.176e-21 | - |
Source | ECs | Term | Type | e value | Identity |
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Sma3 | Beta-glucosidase. | EC:3.2.1.21 | - | 7.048e-15 | - |
Source | KEGGs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Cyanoamino acid metabolism | 00460 | 7.048e-15 | % | |
Sma3 | Starch and sucrose metabolism | 00500 | 7.048e-15 | % | |
Sma3 | Phenylpropanoid biosynthesis | 00940 | 7.048e-15 | % | |
Sma3 | Biosynthesis of secondary metabolites | 01110 | 7.048e-15 | % |
Source | Gene names |
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Sma3 | At3g47000; At3g47000/F13I12.50; At3g47010; At3g47040; At3g47050; At3g62710; At3g62710/F26K9_140; At5g04885; At5g20940; At5g20950; ExoI; F13I12.100; F13I12.50; F13I12.60; F13I12.90; F26K9_140; GSVIVT00002637001; GSVIVT00017475001; GSVIVT00017476001; GSVIVT |
Source | GOs | Term | Type | e value | Identity |
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Sma3 | vacuole | GO:0005773 | Cellular Component | 0.0 | - |
Sma3 | plasma membrane | GO:0005886 | Cellular Component | 0.0 | - |
Sma3 | plant-type cell wall | GO:0009505 | Cellular Component | 0.0 | - |
Sma3 | membrane | GO:0016020 | Cellular Component | 0.0 | - |
Sma3 | anchored to membrane | GO:0031225 | Cellular Component | 0.0 | - |
Sma3 | glucan exo-1,3-beta-glucosidase activity | GO:0004338 | Molecular Function | 0.0 | - |
Sma3 | hydrolase activity, hydrolyzing O-glycosyl compounds | GO:0004553 | Molecular Function | 0.0 | - |
Sma3 | beta-glucosidase activity | GO:0008422 | Molecular Function | 0.0 | - |
Sma3 | xylan 1,4-beta-xylosidase activity | GO:0009044 | Molecular Function | 0.0 | - |
Sma3 | carbohydrate metabolic process | GO:0005975 | Biological Process | 0.0 | - |
Source | InterPros | Term | Type | e value | Identity |
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Sma3 | Double-stranded RNA-binding | IPR001159 | - | 0.0 | - |
Sma3 | Aminoacyl-tRNA synthetase, class I, conserved site | IPR001412 | - | 0.0 | - |
Sma3 | Glycoside hydrolase, family 3, N-terminal | IPR001764 | - | 0.0 | - |
Sma3 | Glycoside hydrolase family 3 C-terminal domain | IPR002772 | - | 0.0 | - |
Sma3 | Double-stranded RNA-binding-like | IPR014720 | - | 0.0 | - |
Sma3 | Protein kinase, ATP binding site | IPR017441 | - | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
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ATG | Arabidoptis thaliana | AT5G20950.1 | Glycosyl hydrolase family protein chr5:7107609-7110775 REVERSE LENGTH=624 | 9.0e-28 | 65% |
RefSeq | Arabidopsis thaliana | NP_197595.2 | Glycosyl hydrolase family protein [Arabidopsis thaliana] | 1.0e-27 | 65% |
RefSeq | Populus trichocarpa | XP_002313632.1 | predicted protein [Populus trichocarpa] | 3.0e-29 | 69% |
Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: coniferopsida.fasta
Fln subject: A9NUD1
Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 58 aas, your sequence is shorter than subject: 80 - 631
Fln protein:
S
Protein Length:
81
Fln nts:
C
Fln Alignment:
GG46A6U02F9SSO___FSYGIVVVGEAPYAEMFGDNLNLTIPLGGGDTIKNVCGSLKCLVILISGRPLVIEPYLPLVDAFVAAWLPGT
A9NUD1_______________FSYAIVVVGEAPYAEMNGDNLNLTIPLGGGDTIKNVCSSLKCLVILISGRPLVIEPYLPLVDAFVAAWLPGT
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain