SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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InterPros
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene71099

Length: 127 nt

UniGene Fasta

>sp_v3.0_unigene71099
CGTCGTGACCTTGGCTGTCACTCATATCTCAATAATCAGACGGTCGGAGGATGGACTGAAGCATATGAAGGGCTTACCTACGCAACCGTAAGAGGGGCTGGCCATTTTGTTCCACTTTTCCAACCTG

Ace file of the UniGene sp_v3.0_unigene71099

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	putative serine carboxypeptidase II [Arabidopsis thaliana]	-	-	2.0e-07	76%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	63%
Sma3	Serine carboxypeptidase, putative	-	-	2.732e-06	-

Source	ECs	Term	Type	e value	Identity
Sma3	Carboxypeptidase D.	EC:3.4.16.6	-	4.385e-10	-

Source	Gene names
Sma3	At3g02110; At4g30610; BRS1; F17I23.50; F1C9.10; GSVIVT00017202001; GSVIVT00038034001; OJ1695_H09.2-1; OJ1695_H09.2-3; Os02g0794500; OsI_09265; OsJ_08702; P0700F06.34-1; P0700F06.34-3; POPTRDRAFT_668664; RCOM_0623820; RCOM_1025080; SCPL24; SCPL25; VITISV_0

Source	GOs	Term	Type	Identity
Sma3	extracellular region	GO:0005576	Cellular Component	-
Sma3	extracellular space	GO:0005615	Cellular Component	-
Sma3	serine-type carboxypeptidase activity	GO:0004185	Molecular Function	-
Sma3	proteolysis	GO:0006508	Biological Process	-
Sma3	brassinosteroid mediated signaling pathway	GO:0009742	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Peptidase S10, serine carboxypeptidase	IPR001563	-	0.0	-
Sma3	Peptidase S10, serine carboxypeptidase, active site	IPR018202	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT4G30610.1	BRS1, SCPL24 alpha/beta-Hydrolases superfamily protein chr4:14944219-14948391 FORWARD LENGTH=465	2.0e-11	76%
RefSeq	Arabidopsis thaliana	NP_194790.1	carboxypeptidase D [Arabidopsis thaliana]	2.0e-11	76%
RefSeq	Populus trichocarpa	XP_002306020.1	predicted protein [Populus trichocarpa]	1.0e-11	69%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NUH4

Fln msg: Distance to subject end: 26 aas, your sequence is shorter than subject: 42 - 450

Fln protein: RRDLGCHSYLNNQTVGGWTEAYEGLTYATVRGAGHFVPLFQP

Protein Length: 43

Fln nts: CGTCGTGACCTTGGCTGTCACTCATATCTCAATAATCAGACGGTCGGAGGATGGACTGAAGCATATGAAGGGCTTACCTACGCAACCGTAAGAGGGGCTGGCCATTTTGTTCCACTTTTCCAACCTG

Fln Alignment:

GG46A6U02JFV7E___HSYLNNQTVGGWTEAYEGLTYATVRGAGHFVPLFQP
A9NUH4_______________HPWYDNGQVGGWTQVYEGLTFVTVRGAGHEVPLHEP

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain