SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene71026

Length: 244 nt

UniGene Fasta

>sp_v3.0_unigene71026
CGTCGTGACCTTGGCTGTCACTCAAAGATCCTCTGCTGGACTTCTCCTTCTGGCAATTCTTCAGTTTTTACTGGATTATGGGGAGACAACTTTGCATGATGCAGATGCTAGCATCCGAACATTCTTCCGTTCATGTCTAAGCCGGCAATTTACAGATTCTTTAGTAGCTGCAGCAACTCTTAATTTTCTCAACCGGAATAAAACAAGTTGTTCAATGCGTATCCATCTCTTCTTCCTGAGTATT

Ace file of the UniGene sp_v3.0_unigene71026

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).	-	-	0.0	70%
Sma3	Os04g0626900 protein	-	-	9.747e-06	-

Source	Gene names
Sma3	At3g15160; GSVIVT00027374001; OSIGBa0117N13.4; OSJNBb0060E08.15; Os04g0626900; OsI_17519; OsJ_16251; PHYPADRAFT_114384; POPTRDRAFT_834130; RCOM_0185260;

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G15160.1	" unknown protein; Has 266 Blast hits to 264 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 58; Fungi - 0; Plants - 199; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). chr3:5104582-5108279 FORWARD LENGTH=562"	4.0e-11	60%
RefSeq	Arabidopsis thaliana	NP_188134.2	uncharacterized protein [Arabidopsis thaliana]	5.0e-11	60%
RefSeq	Populus trichocarpa	XP_002317582.1	predicted protein [Populus trichocarpa]	1.0e-12	63%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: A9RHZ1

Fln msg: Distance to subject end: 422 aas, your sequence is shorter than subject: 81 - 574

Fln protein: VVTLAVTQRSSAGLLLLAILQFLLDYGETTLHDADASIRTFFRSCLSRQFTDSLVAAATLNFLNRNKTSCSMRIHLFFLSI

Protein Length: 82

Fln nts: CGTCGTGACCTTGGCTGTCACTCAAAGATCCTCTGCTGGACTTCTCCTTCTGGCAATTCTTCAGTTTTTACTGGATTATGGGGAGACAACTTTGCATGATGCAGATGCTAGCATCCGAACATTCTTCCGTTCATGTCTAAGCCGGCAATTTACAGATTCTTTAGTAGCTGCAGCAACTCTTAATTTTCTCAACCGGAATAAAACAAGTTGTTCAATGCGTATCCATCTCTTCTTCCTGAGTATT

Fln Alignment:

GG46A6U02H7T71___VTQRSSAGXXXXXXXXXXXDYGETTLHDADASIRTFFRSCLSRQFTDSLVAAATLNFLNRNK
A9RHZ1_______________LSQKASTGLLLLAILQFFLDFGEIVLHDSDPSLRTFFRSCLSRQYADATVAAATLKFLNQNK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain