SustainPineDB

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Assembly info
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SSRs
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene70698

Length: 185 nt

UniGene Fasta

>sp_v3.0_unigene70698
CGTCGTGACCTTGGCTGTCACTCAGTATTACTTCGGATCCTATTGGTGGGGCTGCATACAGAAATGAAACTCAAACTATCTACATGGGTGGAGAAGACACCCATGGGGTGCCTGCAAATCCTTTGGAGATTACATGGAAAGCAGATCGGAACACACCTGATGAAGTCTTCTATCAATCGTATTAT

Ace file of the UniGene sp_v3.0_unigene70698

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DOMON and dopamine beta-monooxygenase N-terminal domain-containing protein [Arabidopsis thaliana] dbj\|BAB08762.1\| unnamed protein product [Arabidopsis thaliana] gb\|AAL90897.1\| AT5g54830/MBG8_9 [Arabidopsis thaliana] gb\|AAO11544.1\| At5g54830/MBG8_9 [Arabid	-	-	1.0e-10	51%
FL-Next	tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice).	-	-	0.0	62%
Sma3	Os09g0557700 protein	-	-	7.31e-06	-

Source	Gene names
Sma3	Os09g0557700; OsI_32359; OsJ_30308; POPTRDRAFT_561973;

Source	GOs	Term	Type	e value	Identity
Sma3	dopamine beta-monooxygenase activity	GO:0004500	Molecular Function	0.0	-
Sma3	histidine catabolic process	GO:0006548	Biological Process	0.0	-

Source	InterPros	Term	Type	Identity
Sma3	DOMON domain	IPR005018	-	-
Sma3	Cytochrome b561/ferric reductase transmembrane	IPR006593	-	-
Sma3		IPR013050	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G54830.1	DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein chr5:22273394-22276117 FORWARD LENGTH=907	1.0e-14	51%
RefSeq	Arabidopsis thaliana	NP_200294.1	DOMON and dopamine beta-monooxygenase N-terminal domain-containing protein [Arabidopsis thaliana]	2.0e-14	51%
RefSeq	Populus trichocarpa	XP_002309666.1	predicted protein [Populus trichocarpa]	3.0e-16	58%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: A2Z3Z4

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 408 aas, your sequence is shorter than subject: 61 - 727

Fln protein: S*PWLSLSITSDPIGGAAYRNETQTIYMGGEDTHGVPANPLEITWKADRNTPDEVFYQSYY

Protein Length: 62

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGTATTACTTCGGATCCTATTGGTGGGGCTGCATACAGAAATGAAACTCAAACTATCTACATGGGTGGAGAAGACACCCATGGGGTGCCTGCAAATCCTTTGGAGATTACATGGAAAGCAGATCGGAACACACCTGATGAAGTCTTCTATCAATCGTATTAT

Fln Alignment:

GG46A6U02FUFZB___LSLSITSDPIGG-AAYRNETQTIYMGGEDTHGVPANPLEITWKADRNTPDEVFYQSYY
A2Z3Z4_______________VALYITSDPIGGNATLRNKTEVIYAGSRDAHGVPATPTELLWLPDRNTPDLVYYQSLY

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain