SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene70685

Length: 215 nt

UniGene Fasta

>sp_v3.0_unigene70685
CGTCGTGACCTTGGCTGTCACTCAGTTGTGCGTTGTTTGGAGTCACATTCCGGTATGCCATTAGAAGAGATCTGGATAATATCCAGCTTAAAACTGGAGCTGCTGCCGCATTCGCTGTTGTTAGAGGTCTTGCTTTGTTGGAATCTGGGAGGCCCTTTGAGTTGAGCACTGATGCCTTAAGGTCACTTGCTCTTGATGGTGCAGTTAGTGTTGCT

Ace file of the UniGene sp_v3.0_unigene70685

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein OJ1531_B07.14; Oryza sativa subsp. japonica (Rice).	-	-	0.0	90%
Sma3	Putative uncharacterized protein At4g24090	-	-	9.747e-06	-

Source	Gene names
Sma3	AT4g24090; At4g24090; GSVIVT00000533001; OJ1531_B07.14; OsI_32127; OsJ_30093; POPTRDRAFT_838581; RCOM_1313120; VITISV_034703;

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT4G24090.1	" unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 144 Blast hits to 142 proteins in 73 species: Archa	3.0e-11	62%
RefSeq	Arabidopsis thaliana	NP_194140.2	uncharacterized protein [Arabidopsis thaliana]	4.0e-11	62%
RefSeq	Populus trichocarpa	XP_002297952.1	predicted protein [Populus trichocarpa]	1.0e-11	61%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: Q69NG3

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 30 aas, your sequence is shorter than subject: 71 - 187

Fln protein: S*PWLSLSCALFGVTFRYAIRRDLDNIQLKTGAAAAFAVVRGLALLESGRPFELSTDALRSLALDGAVSVA

Protein Length: 72

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGTTGTGCGTTGTTTGGAGTCACATTCCGGTATGCCATTAGAAGAGATCTGGATAATATCCAGCTTAAAACTGGAGCTGCTGCCGCATTCGCTGTTGTTAGAGGTCTTGCTTTGTTGGAATCTGGGAGGCCCTTTGAGTTGAGCACTGATGCCTTAAGGTCACTTGCTCTTGATGGTGCAGTTAGTGTTGCT

Fln Alignment:

GG46A6U02HVVFU___LSCALFGVTFRYAIRRDLDNIQLKTXXXXXXXXXXXXXXXESGRPFELSTDALRSLALDGAVSV
Q69NG3_______________ISCALFGVTFRYAIRRDLDNVQLKTGAAAAFAFVRGLAMVESGRPFELSTDALISLALDGAVSV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain