SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene70059

Length: 190 nt

UniGene Fasta

>sp_v3.0_unigene70059
CGTCGTGACCTTGGCTGTCACTCAGGGATTGATATCTATTTTGACAATGTGGGAGGTGAGATGCTTGACGCAGTTCTGGAAAATATGAACCAGCATGGGCGTATTGTTTCTTGTGGGATGATTCTCACAATATAATCTGGAGGTAAAGACGAGGCTATTAAAAACTTGGGGCATGTGATAACCAAGAGGC

Ace file of the UniGene sp_v3.0_unigene70059

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Quinone oxidoreductase-like protein n=3 Tax=Arabidopsis thaliana RepID=Q9LFK4_ARATH	-	-	2.0e-09	58%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	57%
Sma3	Chromosome chr5 scaffold_72, whole genome shotgun sequence	-	-	1.519e-07	-

Source	Gene names
Sma3	At3g03080; At5g16960; B1078G07.5; F2K13_110; F2K13_150; GSVIVT00034732001; GSVIVT00034733001; GSVIVT00034734001; Os01g0891300; OsI_04735; OsI_04748; OsI_37856; OsJ_04369; POPTRDRAFT_786536; RCOM_0605880; RCOM_0605930; T17B22.23; VITISV_043826; VITISV_0438

Source	GOs	Term	Type	Identity
Sma3	zinc ion binding	GO:0008270	Molecular Function	-
Sma3	oxidoreductase activity	GO:0016491	Molecular Function	-
Sma3	oxidation-reduction process	GO:0055114	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Alcohol dehydrogenase superfamily, zinc-type	IPR002085	-	-
Sma3	Alcohol dehydrogenase, C-terminal	IPR013149	-	-
Sma3	NAD(P)-binding domain	IPR016040	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G16980.2	-	3.0e-14	58%
RefSeq	Arabidopsis thaliana	NP_197200.2	2-alkenal reductase [Arabidopsis thaliana]	2.0e-14	58%
RefSeq	Populus trichocarpa	XP_002309720.1	predicted protein [Populus trichocarpa]	2.0e-12	58%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9P0J2

Fln msg: Distance to subject end: 67 aas, your sequence is shorter than subject: 63 - 344

Fln protein: RRDLGCHSGIDIYFDNVGGEMLDAVLENMNQHGRIVSCGMILTI*SGGKDEAIKNLGHVITKR

Protein Length: 64

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGGGATTGATATCTATTTTGACAATGTGGGAGGTGAGATGCTTGACGCAGTTCTGGAAAATATGAACCAGCATGGGCGTATTGTTTCTTGTGGGATGATTCTCACAATATAATCTGGAGGTAAAGACGAGGCTATTAAAAACTTGGGGCATGTGATAACCAAGAGGC

Fln Alignment:

GG46A6U02H6ASE___SGIDIYFDNVGGEMLDAVLENMNQHGRIVSCGMILTI*SGGKDEAIKNLGHVITKR
A9P0J2_______________NGIDIYFENVGSKMLEAVLENMNLHGRIAACGMISEY-NLEEGQGIRNISRVISKR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain