SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene69765

Length: 197 nt

UniGene Fasta

>sp_v3.0_unigene69765
CGTCGTGACCTTGGCTGTCACTCAATCAGAGTCAGAATTGAATGAGCTTGGGTGGAGGCAGGCTAATGCAGTTGCTGAGCGATTAGCAAAAGAACCAAATATTTCGGCATTATATTCCTCAGACTTGAAACGTGCTCTTGACACTGCTACAACTATAGGCCAGAAGTGTGGATTGCAGGTAAAATCAAATACAGCAT

Ace file of the UniGene sp_v3.0_unigene69765

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	phosphoglycerate mutase-like protein [Arabidopsis thaliana]	-	-	2.0e-07	61%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	94%

Source	Gene names
Sma3	GSVIVT00009693001;

Source	GOs	Term	Type	e value	Identity
Sma3	catalytic activity	GO:0003824	Molecular Function	0.0	-
Sma3	metabolic process	GO:0008152	Biological Process	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Phosphoglycerate/bisphosphoglycerate mutase, active site	IPR001345	-	0.0	-
Sma3	Histidine phosphatase superfamily, clade-1	IPR013078	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G04120.1	Phosphoglycerate mutase family protein chr5:1120091-1121605 FORWARD LENGTH=238	7.0e-12	61%
RefSeq	Arabidopsis thaliana	NP_196032.1	phosphoglycerate mutase-like protein [Arabidopsis thaliana]	9.0e-12	61%
RefSeq	Populus trichocarpa	XP_002310737.1	predicted protein [Populus trichocarpa]	6.0e-11	57%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NU77

Fln msg: Distance to subject end: 136 aas, your sequence is shorter than subject: 65 - 233

Fln protein: VVTLAVTQSESELNELGWRQANAVAERLAKEPNISALYSSDLKRALDTATTIGQKCGLQVKSNTA

Protein Length: 66

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATCAGAGTCAGAATTGAATGAGCTTGGGTGGAGGCAGGCTAATGCAGTTGCTGAGCGATTAGCAAAAGAACCAAATATTTCGGCATTATATTCCTCAGACTTGAAACGTGCTCTTGACACTGCTACAACTATAGGCCAGAAGTGTGGATTGCAGGTAAAATCAAATACAGCAT

Fln Alignment:

GG46A6U01AC3KX___QSESELNELGWRQANAVAERLAKEPNISALYSSDLKRALDTATTIGQKCGLQVKSNTA
A9NU77_______________QSESELNELGWRQANAVAERLAKEPKISALYSSDLKRALDTATTIGQKCGLQVISNPA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain