UniGene Name: sp_v3.0_unigene69758
Length: 245 nt
UniGene Fasta |
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>sp_v3.0_unigene69758
C |
Ace file of the UniGene sp_v3.0_unigene69758 |
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Annotations |
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Source | Descriptions | Term | Type | e value | Identity |
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AutoFact | Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA | - | - | 9.0e-37 | 89% |
FL-Next | tr=Laccase; Pinus taeda (Loblolly pine). | - | - | 0.0 | 92% |
Sma3 | Laccase, putative | - | - | 2.8026e-44 | - |
Source | ECs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Laccase. | EC:1.10.3.2 | - | 0.0 | - |
Sma3 | L-ascorbate oxidase. | EC:1.10.3.3 | - | 9.893e-38 | - |
Source | KEGGs | Term | Type | e value | Identity |
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Sma3 | Ascorbate and aldarate metabolism | 00053 | 9.893e-38 | % | |
Sma3 | Metabolic pathways | 01100 | 9.893e-38 | % |
Source | Gene names |
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Sma3 | At1g18140; At2g29130; At2g30210; At2g38080; At2g40370; At5g01190; At5g03260; At5g05390; At5g07130; At5g09360; At5g48100; At5g58910; At5g60020; B1088C09.5; F15A17_290; F16M14.1; F7J8.170; GLac1; GLac3; GLac90; GSVIVT00001780001; GSVIVT00005403001; GSVIVT00 |
Source | GOs | Term | Type | e value | Identity |
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Sma3 | integral to membrane | GO:0016021 | Cellular Component | 0.0 | - |
Sma3 | apoplast | GO:0048046 | Cellular Component | 0.0 | - |
Sma3 | copper ion binding | GO:0005507 | Molecular Function | 0.0 | - |
Sma3 | laccase activity | GO:0008471 | Molecular Function | 0.0 | - |
Sma3 | oxidoreductase activity | GO:0016491 | Molecular Function | 0.0 | - |
Sma3 | response to water deprivation | GO:0009414 | Biological Process | 0.0 | - |
Sma3 | lignin biosynthetic process | GO:0009809 | Biological Process | 0.0 | - |
Sma3 | secondary cell wall biogenesis | GO:0009834 | Biological Process | 0.0 | - |
Sma3 | lignin catabolic process | GO:0046274 | Biological Process | 0.0 | - |
Sma3 | oxidation-reduction process | GO:0055114 | Biological Process | 0.0 | - |
Source | InterPros | Term | Type | e value | Identity |
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Sma3 | Peptidase, cysteine peptidase active site | IPR000169 | - | 0.0 | - |
Sma3 | Oxidoreductase, molybdopterin-binding domain | IPR000572 | - | 0.0 | - |
Sma3 | Multicopper oxidase, type 1 | IPR001117 | - | 0.0 | - |
Sma3 | Multicopper oxidase, copper-binding site | IPR002355 | - | 0.0 | - |
Sma3 | Auxin efflux carrier | IPR004776 | - | 0.0 | - |
Sma3 | Bacterial extracellular solute-binding family 1, conserved site | IPR006061 | - | 0.0 | - |
Sma3 | Cupredoxin | IPR008972 | - | 0.0 | - |
Sma3 | TonB box, conserved site | IPR010916 | - | 0.0 | - |
Sma3 | Multicopper oxidase, type 2 | IPR011706 | - | 0.0 | - |
Sma3 | Multicopper oxidase, type 3 | IPR011707 | - | 0.0 | - |
Sma3 | Reverse transcriptase, RNA-dependent DNA polymerase | IPR013103 | - | 0.0 | - |
Sma3 | Laccase | IPR017761 | - | 0.0 | - |
Sma3 | Glycoside hydrolase, family 1, active site | IPR018120 | - | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
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ATG | Arabidoptis thaliana | AT5G05390.1 | LAC12 laccase 12 chr5:1594753-1597042 FORWARD LENGTH=565 | 3.0e-37 | 74% |
RefSeq | Arabidopsis thaliana | NP_196158.1 | laccase 12 [Arabidopsis thaliana] | 4.0e-37 | 74% |
RefSeq | Populus trichocarpa | XP_002312187.1 | laccase 90b, partial [Populus trichocarpa] | 1.0e-37 | 74% |
Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: coniferopsida.fasta
Fln subject: Q9AUI5
Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 38 aas, your sequence is shorter than subject: 81 - 576
Fln protein:
S
Protein Length:
82
Fln nts:
C
Fln Alignment:
GG46A6U01DYZCF___LSLILQGTNIFAGESHPIHLHGYDFYIVGAGFGNYNSQADPQKFNLVDPPMRNTVNVPVNGWAAIRFVADNPGAWLM
Q9AUI5_______________VQLILQGTNIFAGESHPIHLHGYDFYIVGAGFGNYNAQTDPHKFNLVDPPMRNTVNVPVNGWAAIRFVADNPGAWVM
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain