SustainPineDB

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Assembly info
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SSRs
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene69673

Length: 193 nt

UniGene Fasta

>sp_v3.0_unigene69673
CGTCGTGACCTTGGCTGTCACTCATCATTGCATTTTCTTGGTCTGTAATAAAGGACGAGGTTACAGTCATAAATTTGATTGGATATGGACTGGCCTTTCTGGCTGTCTGTTACTATAATCATTTGAAGCTTCAAGCTCTCAAGGCCAATGACAGCCAACCGAAGCAGCTCAGACCTGCAGCTGAAGCTGATGA

Ace file of the UniGene sp_v3.0_unigene69673

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Plastidic phosphate translocator-like protein1 n=1 Tax=Mesembryanthemum crystallinum RepID=Q59IV6_MESCR	-	-	1.0e-13	71%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	66%
Sma3	Plastidic phosphate translocator-like protein1	-	-	5.844e-12	-

Source	Gene names
Sma3	AT2G25520; AT4g32390; At2g25520; At4g32390; At5g11230; At5g25400; F2I11_120; F8B4.90; GSVIVT00016883001; GSVIVT00032633001; OJ1579_G03.4; Os05g0494500; OsI_04109; OsI_20453; OsJ_03783; OsJ_19045; P0003D09.42; P0034E02.5; PHYPADRAFT_181500; PHYPADRAFT_1908

Source	GOs	Term	Type	e value	Identity
Sma3	integral to membrane	GO:0016021	Cellular Component	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Domain of unknown function DUF250	IPR004853	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G11230.1	Nucleotide-sugar transporter family protein chr5:3580562-3581617 FORWARD LENGTH=351	4.0e-19	67%
RefSeq	Arabidopsis thaliana	NP_196684.1	Nucleotide-sugar transporter family protein [Arabidopsis thaliana]	6.0e-19	67%
RefSeq	Populus trichocarpa	XP_002309616.1	predicted protein [Populus trichocarpa]	7.0e-19	69%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LQV0

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 21 aas, your sequence is shorter than subject: 63 - 357

Fln protein: S*PWLSLIIAFSWSVIKDEVTVINLIGYGLAFLAVCYYNHLKLQALKANDSQPKQLRPAAEAD

Protein Length: 64

Fln nts: CGTCGTGACCTTGGCTGTCACTCATCATTGCATTTTCTTGGTCTGTAATAAAGGACGAGGTTACAGTCATAAATTTGATTGGATATGGACTGGCCTTTCTGGCTGTCTGTTACTATAATCATTTGAAGCTTCAAGCTCTCAAGGCCAATGACAGCCAACCGAAGCAGCTCAGACCTGCAGCTGAAGCTGATGA

Fln Alignment:

GG46A6U01CNPA7___LIIAFSWSVIKDEVTVINLIGYGLAFLAVCYYNHLKLQALKANDSQPKQLRPAAEA
B8LQV0_______________LLIAFSWSIIKDTVTPVNLLGYGLAFLGVCYYNHSKLQALKLKEAQKKSAPADEEA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain