SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene69307

Length: 198 nt

UniGene Fasta

>sp_v3.0_unigene69307
CGTCGTGACCTTGGCTGTCACTCAGGATCTGTAATTACGACACCCTTCCTGGTGCTCAGCTTGAAGAAAGCAAAGCGAAAGAGATAAAGGAAAATAGCATTGCCATGTTGAAGAAGTTCGAGCAGTATCTGCTCTCCAATCCTTCTTTATACTGATCAATATATCTCTATGCGCATCTGTCTTCGTTTGCATAAATAG

Ace file of the UniGene sp_v3.0_unigene69307

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Pathogenesis-related protein 10 n=1 Tax=Pinus pinaster RepID=D9IWE1_PINPS	-	-	1.0e-15	97%
FL-Next	tr=Pathogenesis-related protein 10; Pinus pinaster (Maritime pine).	-	-	0.0	97%
Sma3	Putative intracellular pathogenesis-related protein	-	-	2.837e-11	-

Source	Gene names
Sma3	PR10-1.1; PR10-1.10; PR10-1.11; PR10-1.12; PR10-1.13; PR10-1.14; PR10-1.2; PR10-1.3; PR10-1.4; PR10-1.5; PR10-1.6; PR10-1.7; PR10-1.8; PR10-1.9; m007d; m007g; picg2; pig4; pr-10;

Source	GOs	Term	Type	e value	Identity
Sma3	defense response	GO:0006952	Biological Process	0.0	-
Sma3	response to biotic stimulus	GO:0009607	Biological Process	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Bet v I domain	IPR000916	-	0.0	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: D9IWE1

Fln msg: Unexpected stop codon in the beginning of your sequence, your sequence is shorter than subject: 51 - 160

Fln protein: S*PWLSLRICNYDTLPGAQLEESKAKEIKENSIAMLKKFEQYLLSNPSLY*

Protein Length: 52

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGGATCTGTAATTACGACACCCTTCCTGGTGCTCAGCTTGAAGAAAGCAAAGCGAAAGAGATAAAGGAAAATAGCATTGCCATGTTGAAGAAGTTCGAGCAGTATCTGCTCTCCAATCCTTCTTTATACTGA___TCAATATATCTCTATGCGCATCTGTCTTCGTTTGCATAAATAG

Fln Alignment:

GG46A6U01ALJK3___ICNYDTLPGAQLEESKAKEIKENSIAMLKKFEQYLLSNPSLY
D9IWE1_______________ICNYETLPGAQLEESKAKEIKENSIAMLKKFEQYLLSNPSLY

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain