SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene69288

Length: 216 nt

UniGene Fasta

>sp_v3.0_unigene69288
CGTCGTGACCTTGGCTGTCACTCAATTTGTTTTCTAATGCGGTAAGTGCCGTGACGCTGCCTGTTGTTCCCATTCTCGCCGCGTTTTTGTTCGAAGAGAAACTGGACGCGGTGAAGATAGTGGCCATGCTCTTGGGGCTCTGGGGATTTATTTCCTATGTTTTTGGTGGATACAAGGACTCCAAGGACGCCGCTTCTGGTTAGAAATTCCAGTAGC

Ace file of the UniGene sp_v3.0_unigene69288

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	putative purine permease 9 [Arabidopsis thaliana] sp\|O49726.1\|PUP9_ARATH RecName: Full=Probable purine permease 9; Short=AtPUP9 emb\|CAA16794.1\| putative protein [Arabidopsis thaliana] emb\|CAB78824.1\| putative protein [Arabidopsis thaliana] gb\|AEE84013.1\|	-	-	6.0e-11	53%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	58%

Source	InterPros	Term	Type	e value	Identity
Sma3	Domain of unknown function DUF250	IPR004853	-	0.0	-
Sma3	Nucleotide-sugar transporter	IPR007271	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT4G18220.1	Drug/metabolite transporter superfamily protein chr4:10078768-10080109 FORWARD LENGTH=344	2.0e-15	53%
RefSeq	Arabidopsis thaliana	NP_193556.1	putative purine permease 9 [Arabidopsis thaliana]	3.0e-15	53%
RefSeq	Populus trichocarpa	XP_002298513.1	predicted protein, partial [Populus trichocarpa]	2.0e-14	49%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LLF0

Fln msg: Unexpected stop codon in the beginning of your sequence, your sequence is shorter than subject: 67 - 367

Fln protein: S*PWLSLNLFSNAVSAVTLPVVPILAAFLFEEKLDAVKIVAMLLGLWGFISYVFGGYKDSKDAASG*

Protein Length: 68

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATTTGTTTTCTAATGCGGTAAGTGCCGTGACGCTGCCTGTTGTTCCCATTCTCGCCGCGTTTTTGTTCGAAGAGAAACTGGACGCGGTGAAGATAGTGGCCATGCTCTTGGGGCTCTGGGGATTTATTTCCTATGTTTTTGGTGGATACAAGGACTCCAAGGACGCCGCTTCTGGTTAG___AAATTCCAGTAGC

Fln Alignment:

GG46A6U01ARFW2___WLSLNLFSNAVSAVTLPVVPILAAFLFEEKLDAVKIVAMLLGLWGFISYVFGGYKDSKDA
B8LLF0_______________FLVSSLFSNVISTLALPVVPILSVGFFHDKMDALKIISMLLSIWGFVSYIFGGYVDSKPA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain