SustainPineDB

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Assembly info
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SSRs
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene69145

Length: 161 nt

UniGene Fasta

>sp_v3.0_unigene69145
CGTCGTGACCTTGGCTGTCACTCAAATCACGATGCTTCGCATCAGCAGGAGGCTCTGGTGGACATGTGGGTTCTCAGCCTCACCGACGTTCTGATCACCAGTAGAAAGTCGACATTTGGTTATGTGGCTCAAGGATTGGGCGGACTGGTTCCTTATCTCAT

Ace file of the UniGene sp_v3.0_unigene69145

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Fucosyltransferase CAZy family GT37-like protein n=2 Tax=Selaginella moellendorffii RepID=D8SB44_SELML	-	-	1.0e-09	71%
FL-Next	sp=Probable fucosyltransferase 9; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	65%

Source	Gene names
Sma3	At1g14070; F16A14.19; F16A14.28; F7A19.15; FT1; FUT7; PHYPADRAFT_90596;

Source	GOs	Term	Type	Identity
Sma3	Golgi apparatus	GO:0005794	Cellular Component	-
Sma3	membrane	GO:0016020	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	galactoside 2-alpha-L-fucosyltransferase activity	GO:0008107	Molecular Function	-
Sma3	cellular cell wall organization	GO:0007047	Biological Process	-
Sma3	cell wall biogenesis	GO:0042546	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Xyloglucan fucosyltransferase	IPR004938	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT1G14110.1	FUT9, ATFUT9 fucosyltransferase 9 chr1:4830297-4831915 FORWARD LENGTH=474	7.0e-12	65%
RefSeq	Arabidopsis thaliana	NP_172863.3	fucosyltransferase 9 [Arabidopsis thaliana]	9.0e-12	65%
RefSeq	Populus trichocarpa	XP_002312258.1	glycosyltransferase family-37 [Populus trichocarpa]	7.0e-11	65%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q9XI77

Fln msg: Distance to subject end: 61 aas, your sequence is shorter than subject: 53 - 474

Fln protein: RRDLGCHSNHDASHQQEALVDMWVLSLTDVLITSRKSTFGYVAQGLGGLVPYL

Protein Length: 54

Fln nts: CGTCGTGACCTTGGCTGTCACTCAAATCACGATGCTTCGCATCAGCAGGAGGCTCTGGTGGACATGTGGGTTCTCAGCCTCACCGACGTTCTGATCACCAGTAGAAAGTCGACATTTGGTTATGTGGCTCAAGGATTGGGCGGACTGGTTCCTTATCTCAT

Fln Alignment:

GG46A6U01CK5PF___HQQEALVDMWVLSLTDVLITSRKSTFGYVAQGLGGLVPYL
Q9XI77_______________HDQKALAEIYLLSLTDELVTSTRSTFGYVAQGLGGLKPWI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain