UniGene Name: sp_v3.0_unigene69142
Length: 247 nt
UniGene Fasta |
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>sp_v3.0_unigene69142
C |
Ace file of the UniGene sp_v3.0_unigene69142 |
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Annotations |
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Source | Descriptions | Term | Type | e value | Identity |
---|---|---|---|---|---|
AutoFact | Ubiquitin-activating enzyme E1 n=1 Tax=Ricinus communis RepID=B9SKZ1_RICCO | - | - | 1.0e-20 | 62% |
FL-Next | sp=Ubiquitin-activating enzyme E1 2; Triticum aestivum (Wheat). | - | - | 0.0 | 65% |
Sma3 | Ubiquitin-activating enzyme E1 | - | - | 3.72e-36 | - |
Source | Gene names |
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Sma3 | At2g30110; At5g06460; GSVIVT00001293001; GSVIVT00024047001; LOC_Os03g18380; LOC_Os11g01510; LOC_Os12g01520; Os03g0294900; Os07g0692900; Os11g0106400; OsI_27435; OsI_34806; OsI_37167; OsJ_10472; OsJ_25682; OsJ_34931; P0034A04.123; PHYPADRAFT_129081; PHYPAD |
Source | GOs | Term | Type | e value | Identity |
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Sma3 | nucleus | GO:0005634 | Cellular Component | 0.0 | - |
Sma3 | plasma membrane | GO:0005886 | Cellular Component | 0.0 | - |
Sma3 | catalytic activity | GO:0003824 | Molecular Function | 0.0 | - |
Sma3 | ubiquitin-protein ligase activity | GO:0004842 | Molecular Function | 0.0 | - |
Sma3 | binding | GO:0005488 | Molecular Function | 0.0 | - |
Sma3 | ATP binding | GO:0005524 | Molecular Function | 0.0 | - |
Sma3 | small protein activating enzyme activity | GO:0008641 | Molecular Function | 0.0 | - |
Sma3 | ligase activity | GO:0016874 | Molecular Function | 0.0 | - |
Sma3 | protein modification process | GO:0006464 | Biological Process | 0.0 | - |
Sma3 | metabolic process | GO:0008152 | Biological Process | 0.0 | - |
Sma3 | protein ubiquitination | GO:0016567 | Biological Process | 0.0 | - |
Sma3 | modification-dependent protein catabolic process | GO:0019941 | Biological Process | 0.0 | - |
Sma3 | response to cadmium ion | GO:0046686 | Biological Process | 0.0 | - |
Sma3 | response to other organism | GO:0051707 | Biological Process | 0.0 | - |
Source | InterPros | Term | Type | e value | Identity |
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Sma3 | Ubiquitin/SUMO-activating enzyme E1 | IPR000011 | - | 0.0 | - |
Sma3 | Ubiquitin-activating enzyme repeat | IPR000127 | - | 0.0 | - |
Sma3 | UBA/THIF-type NAD/FAD binding fold | IPR000594 | - | 0.0 | - |
Sma3 | RNA polymerase, alpha subunit | IPR000722 | - | 0.0 | - |
Sma3 | NAD(P)-binding domain | IPR016040 | - | 0.0 | - |
Sma3 | Ubiquitin-activating enzyme, E1, active site | IPR018074 | - | 0.0 | - |
Sma3 | Ubiquitin-activating enzyme, E1 | IPR018075 | - | 0.0 | - |
Sma3 | EF-Hand 1, calcium-binding site | IPR018247 | - | 0.0 | - |
Sma3 | WD40 repeat, conserved site | IPR019775 | - | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
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ATG | Arabidoptis thaliana | AT2G30110.1 | ATUBA1, MOS5, UBA1 ubiquitin-activating enzyme 1 chr2:12852632-12857369 REVERSE LENGTH=1080 | 4.0e-24 | 63% |
RefSeq | Arabidopsis thaliana | NP_565693.1 | ubiquitin-activating enzyme E1 1 [Arabidopsis thaliana] | 5.0e-24 | 63% |
RefSeq | Populus trichocarpa | XP_002313232.1 | predicted protein, partial [Populus trichocarpa] | 5.0e-25 | 60% |
Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: sp_plants
Fln subject: P31251
Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 856 aas, your sequence is shorter than subject: 81 - 1051
Fln protein:
S
Protein Length:
82
Fln nts:
C
Fln Alignment:
GG46A6U01BRJ1B___ACCNKLQELNNAVAVSFSTESEISPQHLSSFQVVVFTDSSVEKAIEYNDFCHNHNPPIAFIKTDIRGLFGSVF
P31251_______________ACVQKLQELNNAVLVSALT-GDLTKEHLSKFQAVVFTDISLDKAIEFDDYCHSHQPPIAFIKSEVRGLFGSVF
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain