SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene69120

Length: 191 nt

UniGene Fasta

>sp_v3.0_unigene69120
CGTCGTGACCTTGGCTGTCACTCAAATTCAGGTAAAAAATACCAGTACAGCGCCAGTCTCTTATCATCAGAGACGAGAAGAAAAGGATTTTAATTATGCAAAAGGGAAAACACAGGCAACCCCATCAAAAAAGGTTGTAACTTCAGAAGGAATGATAAAAACCATTATACCTTCAAGAGGGTGCAAGCAAA

Ace file of the UniGene sp_v3.0_unigene69120

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	3.0e-12	74%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	74%

Source	InterPros	Term	Type	e value	Identity
Sma3	Ubiquitin-associated/translation elongation factor EF1B, N-terminal	IPR000449	-	0.0	-
Sma3	Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote	IPR015940	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LLR8

Fln msg: Distance to subject end: 343 aas, your sequence is shorter than subject: 63 - 695

Fln protein: VVTLAVTQIQVKNTSTAPVSYHQRREEKDFNYAKGKTQATPSKKVVTSEGMIKTIIPSRGCKQ

Protein Length: 64

Fln nts: CGTCGTGACCTTGGCTGTCACTCAAATTCAGGTAAAAAATACCAGTACAGCGCCAGTCTCTTATCATCAGAGACGAGAAGAAAAGGATTTTAATTATGCAAAAGGGAAAACACAGGCAACCCCATCAAAAAAGGTTGTAACTTCAGAAGGAATGATAAAAACCATTATACCTTCAAGAGGGTGCAAGCAAA

Fln Alignment:

GG46A6U01EVT2S___IQVKNTSTAPVSYHQRREEKDFNYAKGKTQATPSKKVVTSEGMIKTIIPSR
B8LLR8_______________IQVKNIITVPLSYHQRREEKDFNYAKGKTQATPS-RVAASEGTIKSTQPLR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain