SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene68999

Length: 181 nt

UniGene Fasta

>sp_v3.0_unigene68999
CGTCGTGACCTTGGCTGTCACTCATTTTTTGATTCTAGTGACTCAGATCCTGAGGCGCTGGGGCTTTACATGGCCGAGGCCTTAAATAAATACAACATCCTGTATGCCCACTACGTAGAGCCCAGACTGGCAGCTACCTTTGAATCTGTTGCAACAAACAAGAGTCTGTTTCCAATGGAGG

Ace file of the UniGene sp_v3.0_unigene68999

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	12-oxophytodienoic acid 10, 11-reductase n=4 Tax=Pisum sativum RepID=Q9AVK9_PEA	-	-	6.0e-11	66%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	86%
Sma3	12-oxophytodienoic acid 10, 11-reductase	-	-	2.574e-09	-

Source	Gene names
Sma3	OPDAR; OPR1; OPR2; OPR3; PsOPR1; PsOPR3; PsOPR4; PsOPR6;

Source	GOs	Term	Type	Identity
Sma3	FMN binding	GO:0010181	Molecular Function	-
Sma3	oxidoreductase activity	GO:0016491	Molecular Function	-
Sma3	metabolic process	GO:0008152	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	NADH:flavin oxidoreductase/NADH oxidase, N-terminal	IPR001155	-	0.0	-
Sma3	Aldolase-type TIM barrel	IPR013785	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT1G76690.1	OPR2, ATOPR2 12-oxophytodienoate reductase 2 chr1:28778976-28780355 FORWARD LENGTH=374	5.0e-13	52%
RefSeq	Arabidopsis thaliana	NP_177795.1	12-oxophytodienoate reductase 2 [Arabidopsis thaliana]	7.0e-13	52%
RefSeq	Populus trichocarpa	XP_002336741.1	predicted protein, partial [Populus trichocarpa]	1.0e-12	51%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9P127

Fln msg: Distance to subject end: 76 aas, your sequence is shorter than subject: 60 - 376

Fln protein: RRDLGCHSFFDSSDSDPEALGLYMAEALNKYNILYAHYVEPRLAATFESVATNKSLFPME

Protein Length: 61

Fln nts: CGTCGTGACCTTGGCTGTCACTCATTTTTTGATTCTAGTGACTCAGATCCTGAGGCGCTGGGGCTTTACATGGCCGAGGCCTTAAATAAATACAACATCCTGTATGCCCACTACGTAGAGCCCAGACTGGCAGCTACCTTTGAATCTGTTGCAACAAACAAGAGTCTGTTTCCAATGGAGG

Fln Alignment:

GG46A6U01CJDN7___FFDSSDSDPEALGLYMAEALNKYNILYAHYVEPRLAATFESVATNKSLFPM
A9P127_______________YLESSDSDPEALGLYMAEALNRYNILYAHYVEPRLVTTFEPVATNKSLFPM

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain