SustainPineDB

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Assembly info
Unigenes
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SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene68650

Length: 366 nt

UniGene Fasta

>sp_v3.0_unigene68650
CGTCGTGACCTTGGCTGTCACTCAAATTCACAGACGTCTGCTTCTGGTCCGCTTCCTCCTGCTCCAACTGGAATCGATTGGTCGTTGAACCAAGCTCGATCCATCAGGTTTGTTTGTATTTTCATTTGAAAATTTTCTTTTCATGTATATTTTAAACCAATCTCTGGGTACCTGTTTAATTTTATTTTTACATAGTTCAAATCCCAGGAGTTAATTCAAATAGTTTTAACCAAATAGTTGGATGCTTGTTTAGTTACAGTCATTTGCTTATATTCATGTTTATTTATGCAGATGGAATCTGACCGCGAGTGGCCCTCGTCCGAATCCTCAAGGATCTTACCATTATGGAATGATAAATACCTCACG

Ace file of the UniGene sp_v3.0_unigene68650

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	multicopper oxidase, putative (EC:1.10.3.3)	-	-	5.0e-07	92%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	90%
Sma3	Putative PS60	-	-	4.296e-09	-

Source	ECs	Term	Type	e value	Identity
Sma3	L-ascorbate oxidase.	EC:1.10.3.3	-	6.841e-06	-

Source	KEGGs	Term	Type	e value	Identity
Sma3	Ascorbate and aldarate metabolism	00053		6.841e-06	%
Sma3	Metabolic pathways	01100		6.841e-06	%

Source	Gene names
Sma3	GSVIVT00010974001; GSVIVT00012092001; GSVIVT00015539001; Os06g0678800; Os07g0510900; OsI_24168; OsI_26158; OsJ_22366; OsJ_24405; P0003H08.1; P0409B11.36; P0710B08.42; PE; POPTRDRAFT_559908; POPTRDRAFT_588573; POPTRDRAFT_710960; RCOM_0903900; RCOM_1600150;

Source	GOs	Term	Type	Identity
Sma3	receptor activity	GO:0004872	Molecular Function	-
Sma3	copper ion binding	GO:0005507	Molecular Function	-
Sma3	kinase activity	GO:0016301	Molecular Function	-
Sma3	oxidoreductase activity	GO:0016491	Molecular Function	-

Source	InterPros	Term	Type	Identity
Sma3	Multicopper oxidase, type 1	IPR001117	-	-
Sma3	Cupredoxin	IPR008972	-	-
Sma3	Multicopper oxidase, type 2	IPR011706	-	-
Sma3	Multicopper oxidase, type 3	IPR011707	-	-
Sma3	Beta tubulin, autoregulation binding site	IPR013838	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NXG3

Fln msg: Separated hits, possible frame ERROR between 111 and 290, Distance to subject end: 186 aas, your sequence is shorter than subject: 122 - 538

Fln protein: RRDLGCHSNSQTSASGPLPPAPTGIDWSLNQARSIRxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxRWNLTASGPRPNPQGSYHYGMINTS

Protein Length: 123

Fln nts: CGTCGTGACCTTGGCTGTCACTCAAATTCACAGACGTCTGCTTCTGGTCCGCTTCCTCCTGCTCCAACTGGAATCGATTGGTCGTTGAACCAAGCTCGATCCATCAGGTTxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCAGATGGAATCTGACCGCGAGTGGCCCTCGTCCGAATCCTCAAGGATCTTACCATTATGGAATGATAAATACCTCACG

Fln Alignment:

GG46A6U01D7P25___HSNSQTSASGPLPPAPTGIDWSLNQARSIRFxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxRWNLTASGPRPNPQGSYHYGMINTS
A9NXG3_______________YSNSQKSASGPLPPAPTGIDWSLNQARSIRWxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxRWNLTASGPRPNPQGSYHYGMINTS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain