SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene68635

Length: 197 nt

UniGene Fasta

>sp_v3.0_unigene68635
CGTCGTGACCTTGGCTGTCACTCAGTGTTTTGGTGCTTTGATTGCACTTACAGTACTTCTTTACGTTGAAGACTATATAGGATGGGGTGTGGGGTTTGGCATCCCAACTGTAGCTATGGCTCTGGCTCTTTCTCTCTTTCTTTATGGTTCTAAGTTTTATAGGCACCAAGTGATTTTCAGCAGTCCACTCAATGGCC

Ace file of the UniGene sp_v3.0_unigene68635

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Peptide transporter PTR3-A n=2 Tax=Arabidopsis RepID=PTR3_ARATH	-	-	9.0e-10	49%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	58%

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G46050.1	ATPTR3, PTR3 peptide transporter 3 chr5:18675062-18679071 REVERSE LENGTH=582	5.0e-14	49%
RefSeq	Arabidopsis thaliana	NP_199417.1	peptide transporter PTR3-A [Arabidopsis thaliana]	6.0e-14	49%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LQ03

Fln msg: Distance to subject end: 335 aas, your sequence is shorter than subject: 65 - 573

Fln protein: VVTLAVTQCFGALIALTVLLYVEDYIGWGVGFGIPTVAMALALSLFLYGSKFYRHQVIFSSPLNG

Protein Length: 66

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGTGTTTTGGTGCTTTGATTGCACTTACAGTACTTCTTTACGTTGAAGACTATATAGGATGGGGTGTGGGGTTTGGCATCCCAACTGTAGCTATGGCTCTGGCTCTTTCTCTCTTTCTTTATGGTTCTAAGTTTTATAGGCACCAAGTGATTTTCAGCAGTCCACTCAATGGCC

Fln Alignment:

GG46A6U01AXWZ0___CFGALIALTVLLYVEDYIGWGVGFGIPTVAMALALSLFLYGSKFYRHQVIFSSPL
B8LQ03_______________CMGTLLGVTVLLYIQDNVGWGLGFGIPAVTMAVALFIFLCGTRFYRHKLPGGSPL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain