SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene68533

Length: 128 nt

UniGene Fasta

>sp_v3.0_unigene68533
CGTCGTGACCTTGGCTGTCACTCAGGTGACGCGTGAAGAGACAATTATAAAATCTCTTGATCCAGATGCTGCGACAACAAACCGAGATGCCCTAGCAAAAACGATATATTCACGCATGTTTGACTGGA

Ace file of the UniGene sp_v3.0_unigene68533

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Myosin XI, putative n=1 Tax=Ricinus communis RepID=B9RWS3_RICCO	-	-	2.0e-07	76%
FL-Next	tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss).	-	-	0.0	76%

Source	Gene names
Sma3	At5g20490; At5g43900; Ntmy175; POPTRDRAFT_832849; RCOM_1023940; myo11-1; myo11-2; myo15;

Source	GOs	Term	Type	Identity
Sma3	myosin complex	GO:0016459	Cellular Component	-
Sma3	motor activity	GO:0003774	Molecular Function	-
Sma3	actin binding	GO:0003779	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	actin filament-based movement	GO:0030048	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	IQ motif, EF-hand binding site	IPR000048	-	-
Sma3	Myosin head, motor domain	IPR001609	-	-
Sma3	Dilute	IPR002710	-	-
Sma3	Myosin, N-terminal, SH3-like	IPR004009	-	-
Sma3	Dil domain	IPR018444	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G43900.3	MYA2 myosin 2 chr5:17657241-17667413 REVERSE LENGTH=1565	4.0e-11	73%
RefSeq	Arabidopsis thaliana	NP_199203.1	myosin 2 [Arabidopsis thaliana]	5.0e-11	73%
RefSeq	Populus trichocarpa	XP_002311708.1	predicted protein [Populus trichocarpa]	6.0e-11	73%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: D8SGE3

Fln msg: Distance to subject end: 1066 aas, your sequence is shorter than subject: 42 - 1475

Fln protein: VVTLAVTQVTREETIIKSLDPDAATTNRDALAKTIYSRMFDW

Protein Length: 43

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGGTGACGCGTGAAGAGACAATTATAAAATCTCTTGATCCAGATGCTGCGACAACAAACCGAGATGCCCTAGCAAAAACGATATATTCACGCATGTTTGACTGGA

Fln Alignment:

GG46A6U01DQ3BM___VTREETIIKSLDPDAATTNRDALAKTIYSRMFDW
D8SGE3_______________VTRDETITKTLDPMAATVNRDTLAKTIYARLFDW

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain