SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene68520

Length: 196 nt

UniGene Fasta

>sp_v3.0_unigene68520
CGTCGTGACCTTGGCTGTCACTCATTTTGGACCAGAATTTGATTGCTTTCCTGAGGACTTTGGCAATCGACCCCTGCCTAAGGCCATGTCTGAGGCTTCTTATTGTGGAATTGATAGACAAGCAGTCCACCATGGAGAACTTCTAGTTGAAAGTGGTCAATCTTCAGAAAAGAAAGCCTGACTTTTTTGGTATATT

Ace file of the UniGene sp_v3.0_unigene68520

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=TRAUCO; Pinus radiata (Monterey pine) (Pinus insignis).	-	-	0.0	96%
Sma3	TRAUCO	-	-	1.949e-06	-

Source	InterPros	Term	Type	Identity
Sma3	B30.2/SPRY domain	IPR001870	-	-
Sma3	SPla/RYanodine receptor SPRY	IPR003877	-	-
Sma3	SPla/RYanodine receptor subgroup	IPR018355	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B3V288

Fln msg: your sequence is shorter than subject: 60 - 412

Fln protein: VVTLAVTHFGPEFDCFPEDFGNRPLPKAMSEASYCGIDRQAVHHGELLVESGQSSEKKA*

Protein Length: 61

Fln nts: CGTCGTGACCTTGGCTGTCACTCATTTTGGACCAGAATTTGATTGCTTTCCTGAGGACTTTGGCAATCGACCCCTGCCTAAGGCCATGTCTGAGGCTTCTTATTGTGGAATTGATAGACAAGCAGTCCACCATGGAGAACTTCTAGTTGAAAGTGGTCAATCTTCAGAAAAGAAAGCCTGA___CTTTTTTGGTATATT

Fln Alignment:

GG46A6U01APHGF___HFGPEFDCFPEDFGNRPLPKAMSEASYCGIDRQAVHHGELLVESGQSSEKK
B3V288_______________NFGPEFDCFPEDFGNRPLPKAMSEASYCGIDRQAVNHGELLVESGQSSEKK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain