SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene68515

Length: 168 nt

UniGene Fasta

>sp_v3.0_unigene68515
CGTCGTGACCTTGGCTGTCACTCAGAGTGGCCTTGTTGACATGTATTCAAAATGTGGGAGTATAGATAAGGCACGCAAATATTTGATGAAATGCACCAACGAGATCTGGTCTCGTGGAATGCGATGGTTGCGGGGTATGCACAGAATGGACTTGTTGATGAGGCTCGC

Ace file of the UniGene sp_v3.0_unigene68515

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T1H2_RICCO	-	-	8.0e-07	60%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	54%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LLJ0

Fln msg: Overlapping hits, possible frame ERROR between 91 and 76, Distance to subject end: 395 aas, your sequence is shorter than subject: 56 - 644

Fln protein: VVTLAVTQSGLVDMYSKCGSIDKAxxxxxxxHQRDLVSWNAMVAGYAQNGLVDEAR

Protein Length: 57

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGAGTGGCCTTGTTGACATGTATTCAAAATGTGGGAGTATAGATAAGGCAxxxxxxxxxxxxxxxxxxxxxCACCAACGAGATCTGGTCTCGTGGAATGCGATGGTTGCGGGGTATGCACAGAATGGACTTGTTGATGAGGCTCGC

Fln Alignment:

GG46A6U01C53T6___SGLVDMYSKCGSIDKARxxxxxMHQRDLVSWNAMVAGYAQNGLVDEA
B8LLJ0_______________NGLVDMYAKRGCIEFARxxxxxMPQRDVVSWNAMIAGYVQNGLIEDA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain